DRSC/TRiP Functional Genomics Resources

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Protein Alignment grass and CG43742

DIOPT Version :10

Sequence 1:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001261130.1 Gene:CG43742 / 14462622 FlyBaseID:FBgn0263999 Length:474 Species:Drosophila melanogaster


Alignment Length:275 Identity:91/275 - (33%)
Similarity:137/275 - (49%) Gaps:49/275 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 DENFDCGNFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQN 170
            |||  |...::.||:||:....|.  :||.|    :..|.|.|||::|.::|:|||||||..|  
  Fly    24 DEN--CKVKITYRVANGHTAITSQ--FMAAL----YNNSEFFCGGSLIHKQYVLTAAHCVRDL-- 78

  Fly   171 DLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKH--------LIHEKYDARHIMHDIALL 227
            |...:.|||:             .:.|..||.     ||        ::|..:.....::|||||
  Fly    79 DEVTVHLGEN-------------NRSCPIPVC-----KHVLRLNAKVILHPNFHGNIFLNDIALL 125

  Fly   228 KLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQ 292
            :|.|.|.|:.||:|||:.:.:::....:...|.:  |||.||:|:.||||...::...|:|.|.|
  Fly   126 RLEREVIFEAHIRPICIILDEDVTSNNQNNFTAY--GWGKTEHGNISDVLSFIDLVRLPKSMCYQ 188

  Fly   293 AYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGL 357
                  .::.:|.|... .|:|:.||||||.....:.|:  .:.:.|||.|.|...|.  .|.|:
  Fly   189 ------NINTICAGSTS-GDTCESDSGGPLIGNFVHRGK--SRDILFGITSYGDAECS--GLFGV 242

  Fly   358 YTNVGEYVQWITDTM 372
            ||:|..|..||...:
  Fly   243 YTDVNAYKSWIASVV 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 85/257 (33%)
CG43742NP_001261130.1 Tryp_SPc 34..253 CDD:214473 85/257 (33%)
Tryp_SPc 273..467 CDD:473915
Blue background indicates that the domain is not in the aligned region.

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