DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6051 and Rundc3a

DIOPT Version :10

Sequence 1:NP_001097943.1 Gene:CG6051 / 43271 FlyBaseID:FBgn0039492 Length:989 Species:Drosophila melanogaster
Sequence 2:XP_006533751.1 Gene:Rundc3a / 51799 MGIID:1858752 Length:465 Species:Mus musculus


Alignment Length:395 Identity:79/395 - (20%)
Similarity:136/395 - (34%) Gaps:105/395 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GQLWFGAECLAAGSSIMNRETESKE-MRPLAQAVTKSLGNVRVLLRDQCLKNNVPNSKTLHLDLN 161
            ||..|......|.|.:.|....|.| |..::.|..|....:||.|.::.:...:..:      |.
Mouse   100 GQRGFWDYIRLACSKVPNNCVSSIENMENISTARAKGRAWIRVALMEKRMSEYITTA------LR 158

  Fly   162 DS-TTEQLYESLKIFDRLFAEFELSYVSAMVQVKSRHEYEMQQWIGVLFSETLQRALKIGLLDQE 225
            |: ||.:.|:|..|..|    .|.:.::.|:...|..::..              .||..:||.:
Mouse   159 DNRTTRRFYDSGAIMLR----EEATVLTGMLIGLSAIDFSF--------------CLKGEVLDGK 205

  Fly   226 --MVDAFDPGLMFS--------------------------IPRLAIVAG---------------L 247
              :|..:.|.|.|:                          .|.|.:|..               .
Mouse   206 TPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPLVTDEDSWYNKWHKMEQKFR 270

  Fly   248 VVYA-KGPLN--MDMPGDQLSEMFRPFRTILIKIRDLLRNLNNQELYQLEKLLCTNEDINTKVPL 309
            :||| ||.|.  :.:...||.::....|.:.:::.:.... |.:|..:||.::.   ::..::| 
Mouse   271 IVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQ-NQREKRELEGVIL---ELQEQLP- 330

  Fly   310 GSSSIEAPSPEHSSHPTTSSSQNNNNSSNNNHSSSSTNTTSTTTTTAGTTNTHRTVERLVDQRNN 374
                 :.|.|     |.|....       .:|:..:..:...||:......:..|:.|.....|:
Mouse   331 -----DPPPP-----PRTGLIP-------GDHAPLAQGSKELTTSLVNQWPSLSTLHRPEGASNS 378

  Fly   375 N-HNSNSNSSTNPTVEAATLRSPS--MLSLSATSTPTASPAPSPTPS--------HSIASTSSAA 428
            . :..:|..||.|....|:|.|.|  :........|.......||||        .||.|..|.|
Mouse   379 KLYRRHSFMSTEPLSAEASLSSDSQRLGEAKRDEEPWGPIGKDPTPSMLGLCGSLASIPSCKSLA 443

  Fly   429 TSSTN 433
            :..:|
Mouse   444 SFKSN 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6051NP_001097943.1 FYVE_LST2 902..966 CDD:277270
Rundc3aXP_006533751.1 RUN_RUNDC3A 30..196 CDD:439061 25/119 (21%)
bZIP <275..315 CDD:473870 7/40 (18%)
Blue background indicates that the domain is not in the aligned region.

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