DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6051 and rundc3b

DIOPT Version :9

Sequence 1:NP_001097943.1 Gene:CG6051 / 43271 FlyBaseID:FBgn0039492 Length:989 Species:Drosophila melanogaster
Sequence 2:NP_001007417.1 Gene:rundc3b / 492775 ZFINID:ZDB-GENE-041114-121 Length:450 Species:Danio rerio


Alignment Length:529 Identity:104/529 - (19%)
Similarity:170/529 - (32%) Gaps:207/529 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 EEVLQENLAGQL-WFGAE------------CLAAGSSIMNRETESKEMRPLAQAVTKSLGNVRVL 140
            |.:|...|.||: |||.|            |.....|.::   ..:.|..:..:..|....:||.
Zfish    62 EHILSHRLKGQVSWFGYESPRSFWDFIRMACSKVPHSCIH---SIENMENVRSSRAKGRAWIRVA 123

  Fly   141 LRDQCLKNNVPNSKTLHLDLND-STTEQLYESLKIFDRLFAEFELSYVSAMVQVKSRHEYEMQQW 204
            |.::.|      |:.:...|.| .||.:.||.                .|::         :.:.
Zfish   124 LMEKRL------SEYISAALRDFKTTRRFYEE----------------GALL---------LGEE 157

  Fly   205 IGVLFSETLQRALKIGLLDQEMVDAFDPGLMFSIPRLAIVAGLVVYAKGP-LNMDMPGDQLSEMF 268
            .|:| ::||     |||      :|.|    ||.           ..||. |:.|.|   :...:
Zfish   158 AGLL-ADTL-----IGL------NAID----FSF-----------CLKGEGLDEDCP---VVIDY 192

  Fly   269 RPFRTILIKIRDLLRNLNNQELYQLEKLLCTNEDINTKVPLGSSSIEAPSPEHSSHPTTSSSQNN 333
            .|:    :|......::::.|           |::.|   ||||..||.:||  ||...|...:.
Zfish   193 TPY----LKFTQTSDSISSDE-----------EEMRT---LGSSGSEAGTPE--SHMAASLMADQ 237

  Fly   334 NNSSNNNH---------------------------SSSSTNTTSTTTTTAGTTNTHR-------- 363
            ::..:.:.                           |.|.:...:.......|..:|:        
Zfish   238 SSWFSKSKRLEQKYRVVLEQRGYLEELVRLREAQLSESVSQNKALLQRLTDTEISHKLEKEQLEI 302

  Fly   364 TVERLVDQRN--NNHNSNSNSSTNPTVEAATLRSPSMLSLSATSTPTASPAPSPTPSHSIASTSS 426
            .:..|.||..  .||:               |||...|:...|:   ..|:|.....:::|..:.
Zfish   303 IILELQDQLTVLKNHD---------------LRSRQELTSHLTN---QWPSPGALDGNAVALDTL 349

  Fly   427 AATSSTNPPADWSDGDDEDEDDDDIDVDEEDIESSDDGTDEEQLLKDIVSADCASGYLIPNTNLG 491
            .....|.|   |     |::....::....|:..|....|..||                ||:  
Zfish   350 LYRKRTGP---W-----EEKSFPSLEQLSADMSLSQTSLDPVQL----------------NTH-- 388

  Fly   492 NLLQPQEVPLTDNFVASEDDEYGTAEQQGHQGLEEDEPST-----SAAMLAATRTLQRLRLPSSD 551
                            |.|.:.|.|  ..|:..:||.||.     |...:|:.::|..|:    .
Zfish   389 ----------------SLDSKAGLA--HWHREGKEDTPSLRGLCGSLTSMASYKSLASLK----S 431

  Fly   552 NEPLAEPTT 560
            :|.||.|||
Zfish   432 SEYLASPTT 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6051NP_001097943.1 FYVE_LST2 902..966 CDD:277270
rundc3bNP_001007417.1 RUN 56..179 CDD:280855 36/177 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..225 9/35 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584063
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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