DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6059 and cfap58

DIOPT Version :10

Sequence 1:NP_651541.2 Gene:CG6059 / 43270 FlyBaseID:FBgn0039491 Length:884 Species:Drosophila melanogaster
Sequence 2:NP_001119542.1 Gene:cfap58 / 779580 XenbaseID:XB-GENE-5719803 Length:871 Species:Xenopus tropicalis


Alignment Length:929 Identity:238/929 - (25%)
Similarity:417/929 - (44%) Gaps:198/929 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NDKFFSSSYQLVQSLSERFPFLAGKVKL------YVDILSRLHAHYVNE---VEQGRAMHEKVRT 102
            ::|.|.:   |.:...|....|||...|      |..:.|.|...|.||   :.:.|.::.::..
 Frog    12 DEKAFEA---LERDFQEVLQELAGDKSLEKFQIEYEKLHSALKKSYDNEKRLMAKCRELNAEIVA 73

  Fly   103 ADEKLQLALRTTAISEAMMEHLRESLEDAWRNEDATKNREETMQLQLMSL---VRSDQSNMTKGT 164
            ...|:..|::.:...::.:..|::.:|.||:..||...:|:..:..:.||   |:|....:.:|.
 Frog    74 NAAKVATAIKLSQEDQSTISSLKKEIEKAWKMVDAAYEKEQRAKETVNSLKDEVKSLSKLVEQGA 138

  Fly   165 TDHVPISNKDLQLHRLVL-RERDRLAAE--------LKDHQKRLQTNRLYSESVEVMIEVYKEII 220
            .......:.||...:..| :|||.|.||        :|..:.:.:..:...|:.:.:|:..:||.
 Frog   139 GMSAGQEHSDLLSAKEELSKERDELLAEVVKLRENLVKATELQQEAEKSKEEAEQGIIQFQQEIQ 203

  Fly   221 SKLN----------------------ARAKKAELDNFR------LEHRCNVEQDKYEDRLLH--L 255
            .:.|                      |.||:.|:.:.:      .|....:||...|:::|:  :
 Frog   204 MRQNEASRESRKKEKLEKDLRGLQSEAEAKQLEIKSMQQNLTRNKEELQRLEQQLKENKILNERV 268

  Fly   256 NKELVAVVQQNEELQAAEKDFMELAATNEALKQRSDRLSRENHTLTKSLRIMEDEKNKLQTSL-K 319
            :|||..|..:|.:||          ..||.....:|:|::||......|:..|||.|:::..: |
 Frog   269 SKELEQVQMRNNKLQ----------QENEQQSVLNDQLTQENQQKQLELKAKEDEVNQMRQEISK 323

  Fly   320 VSEGLNDAQR---------------RDKL---------DLELARRSAERDAKKKADDSMILERRF 360
            :|:.....||               |:.|         :||.|::.||.|  |||.:.::.||..
 Frog   324 ISKARETIQRKYRQMEEQKIEVEQQRETLKNQITGFERELESAKKQAEID--KKAVEELVRERDM 386

  Fly   361 ---HLLAKKNTELNDQVLVNQNELKVQEKKMLMATAKLNEAIRQKEEIARSRDKLRAEISRLNDI 422
               :||...|.....|.||..:|   |.||      .|.|.|:..:|.|:.:.|:..::.:..| 
 Frog   387 LNKNLLRAANATDKQQSLVKLHE---QSKK------NLEEEIQSYKEEAQKQRKIIYQLEKERD- 441

  Fly   423 VAGVRHEIASIRHQMQDLLTDLLRANKQLDEKDLQV----QKIA----REKREQSLELNDAYKKI 479
                     ...::..||...:|:..:.:..:::|:    :|||    :.|::|:|     |:  
 Frog   442 ---------RYINEASDLTQKVLQHMEDIKVREMQIFDYKKKIAEAETKLKQQQNL-----YE-- 490

  Fly   480 DGIEETLALKSERLEVLQVELQQKQQEFANVKKQMEVIQSEKVMLMKTMDMCSRDRSTLQNTMTK 544
                   |::|:| .:....|.:.|.|...:|::::::..:       :|....:.|:.::.:.|
 Frog   491 -------AVRSDR-NLYSKNLIEAQDEITEMKRKLKIMNHQ-------VDQLKEEISSKESVLVK 540

  Fly   545 --LTHQINQMTSSLAINEKEISSLKNQIEQLNRTVKQKQNEIHAKSRLLASTKTDLREMKIRLEQ 607
              |.||         ..|||..:||.:::      |.||..:..| :|:.:.:.:.:::...:.:
 Frog   541 VHLEHQ---------RIEKEKEALKAELQ------KMKQQSVETK-QLIDNQEAEEKKLLKIISE 589

  Fly   608 AAHTIDTDEKRFKNMACALDEVTKEKSLVGLQMVRRNDEVRLLREKLDMMQKAIDRGTMQYNQRV 672
            |    |.:..|.|.   .|::|..|:.::|.|:||||||:.||.||:.:.|..:::|.:||.|||
 Frog   590 A----DAERLRQKK---ELEQVISERDILGSQLVRRNDELALLYEKIKIQQSILNKGEIQYKQRV 647

  Fly   673 EDIRLLKLEVVNLRTSHECMQREVGNKAAMRHDVIRLERQLNQERLKVSAYSEELSRPCRIHRWR 737
            |||||||||:..||.....:.:.|.|...:|.:|..::|.|.:||.:..|..|||..|..:||||
 Frog   648 EDIRLLKLEIKKLRREKGILTKTVANVEELRREVYHMQRDLLKERTRCRALEEELENPMNVHRWR 712

  Fly   738 VLLGKDPRRFELIRKIQQLLKRNIRLSVERENKAKELAELEHVHEEFKRQMTNLPDPSVRQKLCI 802
            .|...||..:|||:||..|.||.||.:.|...|...|.|.|.::.|.|..:...|.|...::|.:
 Frog   713 KLEASDPSTYELIQKIHTLQKRLIRKTEEVVEKELLLQEKEKLYVELKHILARQPGPEAAEQLQV 777

  Fly   803 QQRINRRQTRQLKAMKAELRI----------------NEIDLKTREHLIEGFQEQ---------- 841
            .|:..|.:|:||||:.|||.:                ||:....:::|.:..:||          
 Frog   778 YQKTLRDKTKQLKALSAELNMYESQNQEHKYEIERLANELQNMKKKYLTQKRREQQAREKERGVA 842

  Fly   842 ---LRLHHLENKENFIGKG 857
               |:..|||. ..|.|.|
 Frog   843 DTFLQQQHLEG-PRFTGGG 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6059NP_651541.2 Smc <251..>524 CDD:440809 71/310 (23%)
SMC_prok_B <425..715 CDD:274008 77/299 (26%)
cfap58NP_001119542.1 PTZ00121 <2..427 CDD:173412 102/438 (23%)
Smc 229..>838 CDD:440809 187/684 (27%)

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