DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5880 and PFA4

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_014640.1 Gene:PFA4 / 854159 SGDID:S000005363 Length:378 Species:Saccharomyces cerevisiae


Alignment Length:347 Identity:88/347 - (25%)
Similarity:140/347 - (40%) Gaps:80/347 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ALTTSVVSI----AYWIGLPFWWAKSQLVTYFLLIVGNWLLLNVVFHYVMAVITPAGHPPEGVSL 132
            |:.|.::|.    |::..|..:.:..:.:|:...:...||      .|.:|:.|..|.|......
Yeast    13 AIPTFLISFIGYGAHYFILSNFLSVPKQITFEFCLSMIWL------SYYLAICTNPGRPLPNYKP 71

  Fly   133 VEAV--SMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYF--FLYMTYTTLGC 193
            ...:  :.|.||.:.||.|:|||..||:|:|.|||||||..||||:.|:.:|  ||:....|...
Yeast    72 PPDIWRNFCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHFLRFLFWIIVTTSV 136

  Fly   194 LFLI----LFGLEIGHKYLWLDHGENWTEIEPLEGQPVKFNLSGHIIPVTHPNEYDEFVLPPA-- 252
            ||.|    ::       ::|..           ...|..|.....:|.:|..:..:.|||...  
Yeast   137 LFCIQAKRIY-------FIWQQ-----------RHLPGYFFKKSELIFLTISSPLNSFVLLTITI 183

  Fly   253 --VHNLPTPIVDTDAASPGRRR-ALWFMAFTNVAVVLALGSLSIWHAKLIT---RGETSVEAHIN 311
              :..|...|::      ||.: ..|.|  ..:..:...|.|:   .|||.   |......:..|
Yeast   184 LFLRCLFNQILN------GRSQIESWDM--DRLESLFNSGRLT---QKLIDNTWRIYPESRSFQN 237

  Fly   312 EAERKRHLQQQRIYIN-----PYNFGTKKNWKLFLGLVRGRSFWRTVLLPSWHKPEG-------T 364
            :.:.:.||.::|...:     ||:|....|..|:||.:.   .|   |.| :..|.|       .
Yeast   238 KKDAEEHLTKKRPRFDELVNFPYDFDLYTNALLYLGPIH---LW---LWP-YGVPTGDGNNFPKN 295

  Fly   365 GLSFHTVNDAPFEDE-----WP 381
            |:|.:..|.: .||.     ||
Yeast   296 GISKYEANSS-LEDHILSLPWP 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 32/67 (48%)
PFA4NP_014640.1 COG5273 1..344 CDD:227598 88/347 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4100
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.