DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and AT4G00840

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_567193.2 Gene:AT4G00840 / 826193 AraportID:AT4G00840 Length:291 Species:Arabidopsis thaliana


Alignment Length:346 Identity:94/346 - (27%)
Similarity:144/346 - (41%) Gaps:104/346 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LGPFFVVGVAALTTSVVSIAYW-IGLPFWW---------AKSQLVTYFLLIVGNWLLLNVVFHYV 116
            ||.|.::    |..:||.::|: :.:..||         |.|.|.. .::.|.::||:.:::.|.
plant    13 LGYFMIL----LVVAVVGVSYYAVVVSTWWPILIRGDHGALSALAA-LIIFVFHFLLIMLLWSYF 72

  Fly   117 MAVITPAGHPPE-------GVSLVEA-----------VSMCGKCIAPKPPRTHHCSICNRCILKM 163
            ..|.|..|..||       |...:||           :..|.||...||||.||||:|.||:|||
plant    73 TTVFTDPGSVPEHFRREMGGGDSLEAGTSTDQGAFGSLGYCTKCRNVKPPRCHHCSVCQRCVLKM 137

  Fly   164 DHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLEGQPVK 228
            ||||.|:.||||..|:::|.|::.||.|..:..::.                             
plant   138 DHHCVWIVNCVGARNYKFFLLFLFYTFLETMLDVIV----------------------------- 173

  Fly   229 FNLSGHIIPVTHPNEYDEFVLPPAVHNLPTPIVDTDAASPGRRRALWFMAFTNVAVVLALGSLSI 293
                  ::|     .:.||......|          ::|||:..:|......|.|.||:|....:
plant   174 ------LLP-----SFIEFFSQAIKH----------SSSPGKLASLVLAFVLNFAFVLSLLCFVV 217

  Fly   294 WHAKLITRGETSVEAHINEAERKRHLQQQRIYINPYNFGTKKNWKLFLGLVRGRSFWRTVLLPSW 358
            .|..|::...||||.|....|.:.          .|:.|.|||::...|  :.::||   |||.:
plant   218 MHISLLSSNTTSVEVHEKNGEVRW----------KYDLGKKKNFEQVFG--KKKAFW---LLPLY 267

  Fly   359 HKPE------GTGLSFHTVND 373
            .|.:      ..||.|.|.:|
plant   268 SKDDIDNITSLEGLEFPTCSD 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 32/61 (52%)
AT4G00840NP_567193.2 zf-DHHC 4..266 CDD:303066 87/322 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55511
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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