DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and AT3G18620

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_188492.2 Gene:AT3G18620 / 821393 AraportID:AT3G18620 Length:345 Species:Arabidopsis thaliana


Alignment Length:304 Identity:72/304 - (23%)
Similarity:111/304 - (36%) Gaps:79/304 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 FVVGVAALTTSVVSIAYWIGLPFWWAKSQLVTYFLLIVGNWLLLNVVFHYVMAVITPAG------ 124
            |||.:|.....|:....|...|..::.|.....|..:....|.::.:..:::.....||      
plant    68 FVVILAVFMLFVICGGIWAAYPVLFSISLACGIFHSVTTATLAISTLSTFILVAFKCAGKPTNIL 132

  Fly   125 ---HPPEGVSLVEAVSMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYFFLYM 186
               ||..|...:...:.|..|..||.||||||..|..|:|.||||||::.||||.|||:||..::
plant   133 YGTHPGVGNGALNNYTFCNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHKYFIAFL 197

  Fly   187 -------TYTTLGCLFL---ILFGLEIGHKYLWLDHGENWTEIEPLEGQPVKFNLSGHIIPVTHP 241
                   :|..:.|::.   ||..:|.|..|                        :..:..|.|.
plant   198 ISAVISTSYAAVMCVYTLIHILPPIEKGAAY------------------------ASDVAHVAHG 238

  Fly   242 NEYDEFVLPPAVHNLPTPIVDTDAASPGRRRALWFMAFTNVAVVLALGSLSIW-HAKLITRGET- 304
            |...   :...|.|:....:........|...|.::...:|:|.:.| |:.:| ....|..|:| 
plant   239 NSIS---ILRVVKNICLTYIANAVFISVRSLVLVYLFVASVSVAIGL-SVLLWQQLSYIYEGKTY 299

  Fly   305 ----------------------------SVEAHINEAE--RKRH 318
                                        |:|.|:....  ||||
plant   300 LSHLSSQGTEEDGEKSCRNLLTFFGCPHSIERHLPTIRNLRKRH 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 32/71 (45%)
AT3G18620NP_188492.2 DHHC 76..>219 CDD:418707 41/142 (29%)
DHHC 149..298 CDD:396215 49/176 (28%)

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