DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and zdhhc3b

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001071225.1 Gene:zdhhc3b / 777709 ZFINID:ZDB-GENE-061110-19 Length:300 Species:Danio rerio


Alignment Length:313 Identity:76/313 - (24%)
Similarity:121/313 - (38%) Gaps:89/313 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 HCLGP----------FFVVGVAALTTSVVS----------IAYWIGLPFWWAKSQLVTYFLLIVG 104
            ||..|          :|:.....:..:|::          :.:.:.||   |:|.|.::....:.
Zfish    23 HCAPPPPRAHSAHDMWFIRDGCGIVCAVITWLLVLYAEFVVVFVMLLP---ARSLLYSFINGALF 84

  Fly   105 NWLLLNVVFHYVMAVITPAGHPPEGVSLVE-----------AVSMCGKCIAPKPPRTHHCSICNR 158
            |.|....:..::.|:.|..|..|:|.:..|           .|..|.||.:.||.|.||||:|.|
Zfish    85 NSLAFLALASHLRAMCTDPGAVPKGNATKEFIESLQLKPGQVVYKCPKCCSIKPDRAHHCSVCKR 149

  Fly   159 CILKMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLE 223
            ||.||||||||:|||||..|.:||.|:..|..|..|..:|.   :...:::. ..|:|.:.....
Zfish   150 CIKKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALLM---VAFHFVFC-FEEDWAKCSSFS 210

  Fly   224 GQPVKFNLSGHIIPVTHPNEYDEFVLPPAVHNLPTPIVDTDAASPGRRRALWFMAFTNVAVVLAL 288
                                      |||...|...:.         ..||.|:.||.|.....:
Zfish   211 --------------------------PPATVILLILLC---------FEALLFLIFTAVMFGTQV 240

  Fly   289 GSLSIWHAKLITRGETSVEAHINE----AERKRHLQQQRIYINPYNFGTKKNW 337
            .|        |...||.:|....|    |:|.:.:..:.::.:|::.    :|
Zfish   241 HS--------ICNDETGIEQLKKEERRWAKRSKWMNMKVVFGHPFSM----SW 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 35/61 (57%)
zdhhc3bNP_001071225.1 zf-DHHC 130..256 CDD:279823 52/172 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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