DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and Hip14

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001261910.1 Gene:Hip14 / 39747 FlyBaseID:FBgn0259824 Length:655 Species:Drosophila melanogaster


Alignment Length:443 Identity:102/443 - (23%)
Similarity:156/443 - (35%) Gaps:131/443 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTRITWRGHSTQELLSIL-------RLRWSYMKHCWHSLTFNA----HMNSSYASDV----CLTP 50
            |.|:.....::|:..|:|       ||||..|..|..:..:.|    .:|:.|....    ||..
  Fly   268 MDRVKEAALTSQQRRSLLSKLRHDKRLRWWSMVACPFTAFYLAGIVFTVNTLYIIKFFLLGCLYS 332

  Fly    51 IFWFV-----DNYTHCLGPFFVVGVAALTTSVVSIAYWI-----GLPFWWAKSQLVTYFLLIVGN 105
            ||..:     |.:...|.|..|.    |.|.......|:     .:.|......|::..||    
  Fly   333 IFHTIGKALFDEHLMALLPLSVY----LATKAWFYVTWLMYIDDAVSFTATVCFLISSLLL---- 389

  Fly   106 WLLLNVVFHYVMAVITPAGH---------PPEGVSLVEAVSMCGKCIAPKPPRTHHCSICNRCIL 161
            |:.....:.....:|.|...         ...|....|..|.|..|:..:|.|:.|||:|:||:.
  Fly   390 WVCFLKSWKGDPGIIRPTREQRFKTIIELSERGGIGFEPASFCSGCLVRRPIRSKHCSVCDRCVA 454

  Fly   162 KMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLEGQP 226
            :.||||||:.||:|..||.||..::....:.|.:: |:|   |.||.                  
  Fly   455 RFDHHCPWVGNCIGLKNHSYFMGFLWMLLIMCAWM-LYG---GSKYY------------------ 497

  Fly   227 VKFNLSGHIIPVTHPN-EYDEFVLPPAVHNLPTPIVDTDAASPGRRRAL--------WFM--AFT 280
                       |...| .:|:|:                    |..||:        |.|  |..
  Fly   498 -----------VNQCNVRFDDFL--------------------GAMRAIGNCDAWVGWVMGNALL 531

  Fly   281 NVAVVLALGSLSIWHAKLITRGETSVEAHINEAERKRHLQQQRIYINPYNFGTKKNWKLFL---- 341
            :::.|:.|.....:  ::|..|.|:.| .:|.. |.||.|.:..: :|:..|..:|...||    
  Fly   532 HMSWVILLTICQTY--QVICLGMTTNE-RMNRG-RYRHFQAKGGH-SPFTRGPIQNLVDFLECSC 591

  Fly   342 -GLVR-GRSFWRTVL--------------LPSWHKPEGTGLSFHTVNDAPFED 378
             |||: .|..|....              |.|...|:|.......| |..:.|
  Fly   592 FGLVQPKRVDWMNYYDYDAQTHQTIEKEPLLSVDCPDGMAGDHQYVXDKTYRD 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 25/61 (41%)
Hip14NP_001261910.1 ANK 52..165 CDD:238125
Ank_2 52..142 CDD:289560
ANK repeat 77..108 CDD:293786
ANK repeat 110..142 CDD:293786
ANK 114..233 CDD:238125
Ank_2 116..209 CDD:289560
ANK repeat 144..175 CDD:293786
ANK repeat 177..209 CDD:293786
Ank_5 198..251 CDD:290568
ANK repeat 212..244 CDD:293786
zf-DHHC 426..559 CDD:279823 47/188 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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