DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5880 and zgc:77880

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_957185.1 Gene:zgc:77880 / 393865 ZFINID:ZDB-GENE-040426-1901 Length:297 Species:Danio rerio


Alignment Length:226 Identity:58/226 - (25%)
Similarity:95/226 - (42%) Gaps:50/226 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LVTYFLLIVGNWLLLNV-----------------VFHYVM---------AVITPAGHPPEGVSLV 133
            ::|||.:...:::::..                 ||:.::         ||.:..|..|...:.:
Zfish    17 ILTYFSVFYADYVVIQYVLIPAYSGSVWCTLHGSVFNIILFLLLACHSKAVFSDPGMVPLPETAI 81

  Fly   134 -----------------EAVSMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRY 181
                             |..::|.:|...:|||.|||.:|.|||.:|||||||:|||||..|.:|
Zfish    82 DFSDLRSQSNRLNDRGCEGWTVCSRCETYRPPRAHHCRVCQRCIRRMDHHCPWINNCVGELNQKY 146

  Fly   182 FFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLEGQ--PVKFNLSGH-IIPVTHPNE 243
            |..::.||.:..|:.:..   :...::|....|...: |..||:  |.|..:..| ||.:.....
Zfish   147 FIQFLFYTGMASLYSMAL---VVSAWVWRIRSEREGD-EEKEGEEAPSKHLIVAHYIILLVESIL 207

  Fly   244 YDEFVLPPAVHNLPTPIVDTDAASPGRRRAL 274
            :..|||......|.:.|.|.......|.|.:
Zfish   208 FGVFVLVIFYDQLVSIITDETPIEQMRNRLI 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 30/61 (49%)
zgc:77880NP_957185.1 zf-DHHC 12..>164 CDD:303066 40/146 (27%)
zf-DHHC 103..235 CDD:279823 46/135 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.