DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and CG4483

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_648294.1 Gene:CG4483 / 39057 FlyBaseID:FBgn0035970 Length:435 Species:Drosophila melanogaster


Alignment Length:335 Identity:77/335 - (22%)
Similarity:129/335 - (38%) Gaps:100/335 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GPFFVVGVAALTTSVVSIAYWIGL---PFWWAK----SQLVTYFLLIVGNWL-LLNVVFHYVMAV 119
            ||..::.:..:.|       |..:   ..|||.    ..::.|.|:    |: ....:::::.::
  Fly    16 GPITLLTLTLIVT-------WTVIHMNSMWWAPGSSLESVLNYALI----WIQTFGTLYNFIRSL 69

  Fly   120 ITPAG------HPPEGVSLVE---AVSMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVG 175
            :...|      ||    .|.:   .:..|.:|...|.||:|||..||||::||||||||:|.|||
  Fly    70 MVGPGFVPLKWHP----QLTKDKMFLQFCTRCNGYKAPRSHHCRRCNRCVMKMDHHCPWINTCVG 130

  Fly   176 YGNHRYFFLYMTYTTLGCL---FLILFGLEIGHKYLWLDHGENWTEIEPLEGQPVKFNLSGHIIP 237
            :.|...|..::.:...|.:   .:|:..:..|.|..||                :::.|. |:  
  Fly   131 WSNQDSFVYFLLFFMSGSIHGGIIIVSAVIRGIKKRWL----------------IRYGLR-HM-- 176

  Fly   238 VTHPNEYDEFVLPPAVHNLPTPIVDTDAASPGRRRALWFMAFTNVAVVLALGSLSIWHAKLITRG 302
                         ..||...|.::           |..|.....:..|||...|.....|.|.:.
  Fly   177 -------------ATVHLTQTNLL-----------ACVFSLGVIMGTVLASIKLLYMQMKSILKN 217

  Fly   303 ETSVEAHI--NEAERKRHLQQQRI--YINPYNFGTKKNWKLFLGLVRGRSFWRTVLLPSWHKPEG 363
            :|.:|..|  ..|.|:....::.|  ::.|||.|.|.|.:        ..|:.|          |
  Fly   218 QTEIENWIVKKAAFRRNAYPRKGIKPFVYPYNLGWKTNMR--------EVFFST----------G 264

  Fly   364 TGLSFHTVND 373
            .|:|:..:.|
  Fly   265 DGISWPVLPD 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 28/64 (44%)
CG4483NP_648294.1 zf-DHHC 88..224 CDD:279823 47/178 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.820

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