DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5880 and CG10344

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_611671.1 Gene:CG10344 / 37565 FlyBaseID:FBgn0034729 Length:278 Species:Drosophila melanogaster


Alignment Length:317 Identity:75/317 - (23%)
Similarity:119/317 - (37%) Gaps:115/317 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 FLLIVGNWLLLNVVFHYVMAVITPAGHPPEG--------------------------------VS 131
            ||:|.   :.|.|||.:.:.|:.||.|.|.|                                |.
  Fly    18 FLIIA---VFLPVVFMFEIVVVLPAFHEPGGFFHTFTFLMAMFLVFNIKGNMIACMMIDTSVNVK 79

  Fly   132 LVEAVS------MCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYFFLYMTYTT 190
            .||..|      .||:|....|||:.||..|..||||.||||.:...|:|..|||:|..::.|..
  Fly    80 KVEPPSDQLNWRECGECQKLAPPRSWHCKACKVCILKRDHHCIYTGCCIGLRNHRFFMGFIFYLF 144

  Fly   191 LGCLFLILFGLEIGHKYLWLDHG---ENWTEIEPLEGQPVKFNLSGHIIPVTHPNEYDEFVLPPA 252
            :|.::.:::    ...|:|:.||   .||..:..|            ..|:.|            
  Fly   145 VGSVYALVY----NSIYMWVIHGHIYSNWVTVLKL------------ACPMLH------------ 181

  Fly   253 VHNLPTPIVDTDAASPGRRRALW---FMAFTNVAVV-LALGSLSI-WHAKLITRGETSVEAHINE 312
               |.|             .:.|   ::.|.::.:: ||.|.|.: :|..::.||..|       
  Fly   182 ---LVT-------------GSFWTNMYLVFYSLNILALAYGVLLLAYHVPIVLRGGVS------- 223

  Fly   313 AERKRHLQQQRIYINPYNFGTKKNWKLFLGLVRGRSFWRTVLLPS--------WHKP 361
            |:|.:..:::      |:.|..:|.:...| .|....|.:.|:.|        |:.|
  Fly   224 ADRTKESKEK------YDRGVYQNLRSVFG-NRMHLAWLSPLIRSDLPEDGYHWNVP 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 25/61 (41%)
CG10344NP_611671.1 DHHC 93..220 CDD:396215 43/170 (25%)

Return to query results.
Submit another query.