DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5880 and Zdhhc6

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001032741.1 Gene:Zdhhc6 / 361771 RGDID:1304657 Length:413 Species:Rattus norvegicus


Alignment Length:343 Identity:101/343 - (29%)
Similarity:147/343 - (42%) Gaps:99/343 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GPFFVVGVAAL--TTSVVSIAYWIGLPFW--WAKSQLVTYFLLIVGNWLLLNVVFHYVMAV---- 119
            ||...:||.|:  |.:::....|    :|  ......|.:.:||  ||.:: ::::|..|:    
  Rat    23 GPIIALGVIAICSTMAMIDSVLW----YWPLHTTGGSVNFIMLI--NWTVM-ILYNYFNAMFAGP 80

  Fly   120 -ITPAGHPPEGVSLVEAVSMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYFF 183
             ..|.|..||.......:..|..|.|.|.||:|||..||||::||||||||:|||.|:.||..|.
  Rat    81 GFVPRGWKPENPQDSMYLQYCKVCQAYKAPRSHHCRKCNRCVMKMDHHCPWINNCCGHQNHASFT 145

  Fly   184 LYMTYTTLGC-----LFLILFGLEIGHKYLWLDHGENWTEIEPLEGQPVKFNLSGHIIPVTHPNE 243
            |::....|||     :|::....::   |..|..|.|          .||.::|           
  Rat   146 LFLLLAPLGCTHAAFIFVMTMYTQL---YNRLSFGWN----------TVKIDMS----------- 186

  Fly   244 YDEFVLPPAVHNLPTPIVDTDAASPGRRRALWFMAFTNVAVVLALGS------LSIWHAKLITRG 302
                    |....|.|||....|:         .|.|..|:.||||:      |.....|:|.|.
  Rat   187 --------AARRDPPPIVPFGLAA---------FAATLFALGLALGTTIAVGMLFFIQIKIILRN 234

  Fly   303 ETSVEAHINE--AERKRHLQQQRIYINPYNFGTK-KNWK-LFLGLVRGRSFWRTVLLPSWHKPEG 363
            :||:|:.|.|  .:|.::.|...:::.||:.|:| ||.| :|.        |..|       |||
  Rat   235 KTSIESWIEEKAKDRIQYYQLDEVFVFPYDMGSKWKNLKQVFT--------WSGV-------PEG 284

  Fly   364 TGLSFHTVNDAPFEDEWP 381
            .||            |||
  Rat   285 DGL------------EWP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 33/66 (50%)
Zdhhc6NP_001032741.1 DHHC 95..241 CDD:396215 60/186 (32%)
SH3_2 317..394 CDD:400139
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.