DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and Zdhhc3

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_038937239.1 Gene:Zdhhc3 / 301081 RGDID:1309041 Length:350 Species:Rattus norvegicus


Alignment Length:193 Identity:65/193 - (33%)
Similarity:90/193 - (46%) Gaps:33/193 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 CLTPIF-------WFVDNYTHCLGPFFVVGVAALTTSVVSIAYWIGLPFWWAKSQLVTYFLL--I 102
            |..|.|       ||:.:  .|     .:..|.:|..:|..|.::.|......|:...|.::  |
  Rat    24 CAPPPFPGPVGTMWFIRD--GC-----GIACAIVTWFLVLYAEFVVLFVMLIPSRDYAYSIINGI 81

  Fly   103 VGNWLLLNVVFHYVMAVITPAGHPPEGVSLVE-----------AVSMCGKCIAPKPPRTHHCSIC 156
            |.|.|....:..:..|::|..|..|:|.:..|           .|..|.||.:.||.|.||||:|
  Rat    82 VFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCPKCCSIKPDRAHHCSVC 146

  Fly   157 NRCILKMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLF-LILFGLEIGHKYLWLDHGENWTE 218
            .|||.||||||||:|||||..|.:||.|:..|..|..|. ||:.|....|.:     .|:||:
  Rat   147 KRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALIMVGFHFLHCF-----EEDWTK 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 36/62 (58%)
Zdhhc3XP_038937239.1 DHHC 128..253 CDD:396215 41/82 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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