DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5880 and Zdhhc21

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001034098.1 Gene:Zdhhc21 / 298184 RGDID:1305750 Length:265 Species:Rattus norvegicus


Alignment Length:287 Identity:74/287 - (25%)
Similarity:105/287 - (36%) Gaps:88/287 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PFWWAKSQLVT----YFLLIVGNWLL------------LNVVFH---------YVMAVITPAGHP 126
            |..|....|:.    |.::|:...:|            |.::|:         .|.|.:|..|..
  Rat    11 PHGWCCMGLIVFVWLYNIVIIPKIVLFPHYEEGHIPGILIIIFYGISIFCLVALVRASLTDPGRL 75

  Fly   127 PEGVSLVEAV----SMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYFFLYMT 187
            ||...:..|.    .:|.||...:|.|:||||.|..|:.:|||||||:|||||..||..|.....
  Rat    76 PENPKIPHAERELWELCNKCNLMRPKRSHHCSRCGHCVRRMDHHCPWINNCVGEDNHWLFLQLCF 140

  Fly   188 YTTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLEGQPVKFNLSGHIIPVTHPNEYDEFVLPPA 252
            ||.|...:.::|  ...|.|                                       :.||..
  Rat   141 YTELLTCYALMF--SFCHYY---------------------------------------YFLPLK 164

  Fly   253 VHNLPTPIVDTDAASPGRRRALWFMAFTNVAVVLALGSLSIWHAKL--ITRGETSVEAHIN---E 312
            ..||...:|..:.|.   .|...||..|     :.:|...:::.:|  |....||:|...|   |
  Rat   165 TRNLDLFVVRHELAI---MRLAAFMGIT-----MLVGITGLFYTQLIGIITDTTSIEKMSNCCEE 221

  Fly   313 AERKRHLQQQRIYINPYNFGTKKNWKL 339
            ..|.|...||..   ...|||:  ||:
  Rat   222 ISRPRKPWQQTF---SEVFGTR--WKI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 30/61 (49%)
Zdhhc21NP_001034098.1 DHHC 92..217 CDD:396215 48/173 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.