DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and Patsas

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_319681.3 Gene:Patsas / 1279899 VectorBaseID:AGAMI1_010831 Length:539 Species:Anopheles gambiae


Alignment Length:146 Identity:40/146 - (27%)
Similarity:64/146 - (43%) Gaps:25/146 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VVSIAYWIGLPFWWAKSQLVTYFLLIVGNWLLL--NVVFHYVMAVIT----PAGHPPEGVSLVEA 135
            :||:..| |.|.:..:...:|:.:|...::..:  |.|. ::..:|.    |...|....:...|
Mosquito   298 LVSVLLW-GYPMYMIRCIPITWNILRRSHYCFIYWNAVM-WISWIIANRRDPGYIPLNSDTYYRA 360

  Fly   136 VS-----------------MCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYFF 183
            :.                 :|..|...:|.|..||.|||||:...|||||::.||||..|..:|.
Mosquito   361 IKQIPYFDKWKKRNIILSRLCHSCRCLRPLRAKHCRICNRCVSYFDHHCPFIYNCVGLRNRMWFL 425

  Fly   184 LYMTYTTLGCLFLILF 199
            |::....:.|.|.|.|
Mosquito   426 LFVLSIAINCSFTIYF 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 27/61 (44%)
PatsasXP_319681.3 None

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