DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and slc66a1l

DIOPT Version :9

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001123690.1 Gene:slc66a1l / 100170445 XenbaseID:XB-GENE-5794175 Length:303 Species:Xenopus tropicalis


Alignment Length:247 Identity:45/247 - (18%)
Similarity:75/247 - (30%) Gaps:106/247 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WSYMKHC-------WHSLT----------------FNAHMNSSYASDVCLTPIF---WFVDNYTH 60
            |..::.|       |..:.                :.||.|...  |..|:..|   |...::|:
 Frog    29 WQLLQQCVENAWEYWSVIVGLVSIACFLFAALPQLYVAHTNGRV--DQALSLGFLLCWLGGDFTN 91

  Fly    61 CLGPFFVVGVAALTTSVVSIAYWIGLPFWWAKSQLVTYFLL----IVGN---------WLLLNV- 111
            .:|.:.   ...|...:::..:::.:..... ||. :|:.|    :.||         |:||.: 
 Frog    92 FIGCYL---TNQLPLQIITAIFYVNMDIIMI-SQF-SYYKLKNNRLKGNGSLKGICISWVLLAIT 151

  Fly   112 -----------------------------------VFHYVMAVITPAGHPP-----------EGV 130
                                               :..||.:|.......|           ||.
 Frog   152 LSILLPSQLLLKKYDKNTDVEISQKSLGITEMSGFICGYVSSVFYLGSRFPQLYKNFHRKSTEGT 216

  Fly   131 S-LVEAVSMCGKC------IAPKPPRTHHCSICNRCILKMDHHCPWLNNCVG 175
            | |:.|::|.|.|      :...|...||.|   :.|:   ||.|||....|
 Frog   217 SYLLFALAMLGNCTYGTSLLLKLPAVGHHMS---QYIM---HHLPWLIGSFG 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 13/43 (30%)
slc66a1lNP_001123690.1 PQ-loop 44..103 CDD:282099 10/63 (16%)
PQ-loop 185..238 CDD:282099 12/52 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55511
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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