DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6066 and nkap

DIOPT Version :10

Sequence 1:NP_651538.1 Gene:CG6066 / 43267 FlyBaseID:FBgn0039488 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001003414.1 Gene:nkap / 336120 ZFINID:ZDB-GENE-030131-8064 Length:368 Species:Danio rerio


Alignment Length:453 Identity:183/453 - (40%)
Similarity:229/453 - (50%) Gaps:120/453 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PQHRRSVSRERKRERDRELHRERTSNRSSRRSREKDAVPRRRRTRSSPSRSSSSSSSDRSSSSRS 97
            |:.||. ||...|..||.|...|.::....:||..|....|.|.|.:.|||.|            
Zfish    14 PRRRRH-SRSSSRSPDRALKNHRHNHEDEHKSRHGDKDRSRNRFRMAYSRSRS------------ 65

  Fly    98 PSRSRKSRPKSVERWPNDR------YHENNDRRQNPFRGRAPEGSFINDPAEPSFRSQHRGRGSS 156
                 :||.:..:.| :||      |:|..|..|     |..:.:||                  
Zfish    66 -----RSRERDRQTW-SDRDHGFSDYYEKRDDAQ-----RQRQEAFI------------------ 101

  Fly   157 NHQFKGDSKAVNARR-NQRVLIGEEGVPEVWGKSPSRPETDDVELVKGSYIGPKKKKKKGKRKHK 220
                        ||| .:|..|||.|.|||||.||...|.|..|..      |.::..|......
Zfish   102 ------------ARRLQERERIGEIGCPEVWGYSPRVREPDSDEHT------PVEEDVKNSSSDS 148

  Fly   221 KSEKKSKKKSKKSKKKKSKQESSSSSSSSSSEDSSDESSSSSSSSSSDSEDESEEEDVWLEKTAD 285
            .||::.|||.||.|||..|:::...|..|.||              ||||:|             
Zfish   149 SSEEEKKKKKKKKKKKSKKRKNRKQSEDSESE--------------SDSEEE------------- 186

  Fly   286 GIKKPKKKKSSTSKKDKKSKKKKKKRKSEAEKSKKSSSSSASKSKNKESASHN-----------D 339
             :||.|||     ||:||.|.||||    |:|::|.||||:|:...:|....|           :
Zfish   187 -MKKKKKK-----KKNKKKKSKKKK----AKKNQKESSSSSSEHSEEEEEDANEISWVEKTCVGE 241

  Fly   340 EDVGPSLRPGGSLNQK----DFGKALLPGEGAAMAAYIAEGKRIPRRGEIGLTSDEIANFESVGY 400
            ..|||. .|...|:|.    |||.|||||||||||.::..||||||||||||||:|||.||..||
Zfish   242 HVVGPD-APLTHLSQDDKPLDFGHALLPGEGAAMAEFVKAGKRIPRRGEIGLTSNEIAEFEKSGY 305

  Fly   401 VMSGSRHRRMEAVRIRKENQLYSADEKRALAMFSKEERQKRENKILSQFKDMIHSKLQAKDKK 463
            ||||||||||||||:|||||:||||||||||.|::|||:|||:||||.|::|::.|.:.||:|
Zfish   306 VMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRESKILSSFREMVYRKTKGKDEK 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6066NP_651538.1 Nkap_C 354..454 CDD:461812 78/103 (76%)
nkapNP_001003414.1 NKAP 90..>140 CDD:464805 24/90 (27%)
Nkap_C 259..358 CDD:461812 76/98 (78%)

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