DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6066 and Nkapl

DIOPT Version :10

Sequence 1:NP_651538.1 Gene:CG6066 / 43267 FlyBaseID:FBgn0039488 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001025084.1 Gene:Nkapl / 291165 RGDID:1311667 Length:395 Species:Rattus norvegicus


Alignment Length:447 Identity:170/447 - (38%)
Similarity:218/447 - (48%) Gaps:102/447 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SRRSREKDAVPRRRRTRSSPSRSSSSSSSDRSSSSR-------SPSRSRK--------SRPKSVE 110
            ||.:.:.....:|||...||.....:|...|...|.       .|.|...        |||:|.|
  Rat     7 SRPNEDTLGSQKRRRGSESPPSVLQTSRFSRGFCSHLSGPEGLQPPRGADGVRPLHSVSRPRSGE 71

  Fly   111 RWPNDRYHENNDRRQNP----FRGRAPEGSFINDPAEPSFRSQHRGRGS---SNHQFKGDSKAVN 168
            |               |    .|..|...|    |....:|..|...|.   |..|.|...::..
  Rat    72 R---------------PLSLGIRTLASSSS----PICGGYRYHHNYAGDCSWSEDQEKEKEESYR 117

  Fly   169 ARR-NQRVLIGEEGVPEVWGKSPSRPE---------TDDVELVKGSYIGPKKKKKKGKRKHKKSE 223
            .|| .:|..|||.|.|||||.||..||         .|:|:..|.|......::|:.|..|   .
  Rat   118 QRRLKERERIGELGAPEVWGLSPKIPEPDSDEHTPAEDEVKNQKSSSSDLTNEEKRTKTSH---S 179

  Fly   224 KKSKKKSKKSKKKKSKQESSSSSSSSSSEDSSDESSSSSSSSSSDSEDESEEEDVWLEKTADGIK 288
            .|.|:|.|.||||..|.:|:|.|...||.||                          :|....||
  Rat   180 TKKKRKKKPSKKKHKKYDSNSDSDIHSSSDS--------------------------DKNKVKIK 218

  Fly   289 KPKKKKSSTSKKDKKSKKKKKKRKSEAEKS-----------KKSSSSSASKSKNKES-ASHNDED 341
            |.:|||...:|:.||.|:.||:....:.|:           ::|.|:.::.....|: .:|..:|
  Rat   219 KKEKKKKHRAKELKKKKRTKKEYNGISCKASGRELPEDVWMEQSMSADSTDLIGPEAPVTHTSQD 283

  Fly   342 VGPSLRPGGSLNQKDFGKALLPGEGAAMAAYIAEGKRIPRRGEIGLTSDEIANFESVGYVMSGSR 406
            ..|       ||   :|.|||||||||||.|:..||||||||||||||:|||:||..||||||||
  Rat   284 EKP-------LN---YGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECSGYVMSGSR 338

  Fly   407 HRRMEAVRIRKENQLYSADEKRALAMFSKEERQKRENKILSQFKDMIHSKLQAKDKK 463
            ||||||||:|||||:||||||||||.|::|||:|||||||:.|::|::.|.:.||.|
  Rat   339 HRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYRKTKGKDDK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6066NP_651538.1 Nkap_C 354..454 CDD:461812 76/99 (77%)
NkaplNP_001025084.1 NKAP 106..178 CDD:464805 24/71 (34%)
Nkap_C 286..385 CDD:461812 78/108 (72%)

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