Protein Alignment CG6066 and let-504

DIOPT Version :10

• Sequence 1: NP_651538.1
• Gene: CG6066 / 43267
• FlyBaseID: FBgn0039488
• Length: 463
• Species: Drosophila melanogaster
• Sequence 2: NP_491301.1
• Gene: let-504 / 171995
• WormBaseID: WBGene00002696
• Length: 504
• Species: Caenorhabditis elegans
• Alignment Length: 495
• Identity: 176/495 - (35%)
• Similarity: 255/495 - (51%)
• Gaps: 79/495 - (15%)

  Fly     2 RSRSR-SRSRQRERRRSDSRARSRSERRTYQKPQHRR------SVSRERKRERDRELHRERTSNR 59
            |..|| ||||.|....||||:||.|.......|:.:|      |.|..|:|..|....|.|:..|
 Worm    45 RDSSRSSRSRSRSSSESDSRSRSSSPVVKNSPPKRKREPIRAPSASPPRRRRDDSPRKRSRSPPR 109

  Fly    60 SSRRSREKDAVPRRRRTRSSPSRSSSSSSSDRSSSSRSPSRSRKSRPKSVERWPNDRYHENNDRR 124
            .:|||   .:.|||||...||.|.|.|....:.|.||||...|:.|.:|.   |..:...:..|.
 Worm   110 RTRRS---PSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSP---PPAKRRRDQSRS 168

  Fly   125 QNP----FRGRAPEGSFINDPAEPSFRSQHRGRGSSNHQFKGDSKAVNARRNQRVLIGEEGVPEV 185
            ::|    :|.|...||    |...::|.:...|         .::..:.||.|||.|..:|:..:
 Worm   169 KSPPRRNYRQRQRSGS----PPVRNWRDEEENR---------RAEMWSKRRFQRVNIQADGLNNI 220

  Fly   186 WGKSPSRPETDDVELVKGSYIGPKKKKKKGKRKHKKSEKKSKKKSKKSKKKKSKQESSSSSSSSS 250
            ||.||:..|..|      :|    |.:...:....::||| :::.|:.::|:.|:|..:..:.
 Worm   221 WGHSPTHEEIHD------TY----KLRVAAEEIQAENEKK-REELKEDRRKEKKREMRAVRNV-- 272

  Fly   251 SEDSSDESSSSSSSSSSDSEDESEEEDVWLEKTADGIKKPKKKKSSTSKKDKKSKKKKKKRKSEA 315
               |.|:||:||.|..||.|.:.:::    .|.:...||.|||:....||.||:.|:|::|::..
 Worm   273 ---SEDDSSTSSESEESDFEQKKKKK----VKKSKKSKKDKKKEKKEKKKSKKANKEKEERRARR 330

  Fly   316 EKSKKSSSSSASKSKNKESASHNDED------VGP-------SLRP-------------GGSLNQ 354
            |:.||..:....|..|:.......|:      ||.       |:.|             ||..:.
 Worm   331 EQRKKERAELKRKINNRSDTEEEWEEKQSEKIVGTIGTWKEGSMSPTPILPEHIKQRDQGGGYDV 395

  Fly   355 K---DFGKALLPGEGAAMAAYIAEGKRIPRRGEIGLTSDEIANFESVGYVMSGSRHRRMEAVRIR 416
            :   ::||.||.||||.||||.|.|:||||||||||:|.|||.:|.||||||||||:.|||.|:|
 Worm   396 EKPGNYGKDLLKGEGAGMAAYAARGERIPRRGEIGLSSGEIAEYEKVGYVMSGSRHKAMEATRLR 460

  Fly   417 KENQLYSADEKRALAMFSKEERQKRENKILSQFKDMIHSK 456
            ||||:::|:|||.|...|.|.::|:|..:|.||:::||.|
 Worm   461 KENQVFTAEEKRILNSVSVEAKKKKEEAVLDQFRNLIHHK 500

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6066	NP_651538.1	Nkap_C	354..454	CDD:461812	60/102 (59%)
let-504	NP_491301.1	Nkap_C	398..499	CDD:461812	61/100 (61%)