DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gb and yjeH

DIOPT Version :10

Sequence 1:NP_651536.1 Gene:gb / 43265 FlyBaseID:FBgn0039487 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_418565.1 Gene:yjeH / 948656 ECOCYCID:G7833 Length:418 Species:Escherichia coli


Alignment Length:458 Identity:105/458 - (22%)
Similarity:202/458 - (44%) Gaps:74/458 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 IKKQLGLLEGVAIILGIIFGSGIFVSPKGVIREVESVGASLVIWVLCGLLSMIGALCYAELGTAI 119
            :|::|||.:|:.::...:.|:|:|..|  .:..:.:...||..|.:..:|....|:.:|.||...
E. coli     4 LKQELGLAQGIGLLSTSLLGTGVFAVP--ALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHY 66

  Fly   120 PKSGGDYAYIFEAYGS----LPAFLYLWDAMMIFVPTTNAIMGLTFASYVLEPFFGGACEIPKIA 180
            |.:||...::..|:||    :..:|:|     ..:|     :||..|..:...|  |.......:
E. coli    67 PSAGGVAHFVGMAFGSRLERVTGWLFL-----SVIP-----VGLPAALQIAAGF--GQAMFGWHS 119

  Fly   181 LQLLAAI--TICFLTYLNSYYMKVTTKMQNVIMFTKIAALVLIILVGLVWMMMGNVENFTRPFDN 243
            .|||.|.  |:..:.|:.:.....:..:|.|     ||.|::.::|.:.|  .|:::....||  
E. coli   120 WQLLLAELGTLALVWYIGTRGASSSANLQTV-----IAGLIVALIVAIWW--AGDIKPANIPF-- 175

  Fly   244 TETDPGKMSVAFYSGIFS--------YAGWNYLNFMTEELRDPYRNLPRAIYISLPLVTGIYVLA 300
              ..||.:.:   :|:|:        :.|......:..|.::|.|:.|||:.|.|.|...:|...
E. coli   176 --PAPGNIEL---TGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGC 235

  Fly   301 NVAYLAVLSPSEMIASNAIAVTFGDKILGVFSLIIPLMVA-ISAFGGLSVHIMTSSRICFVGARN 364
            .|..|...:..|.:|:.|.......::.||.:|.|..::. ::.|..|:::|.:.:|:.:..|::
E. coli   236 TVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQH 300

  Fly   365 G--HMPAILS--HISVKSYTPLPSLVFLCFLSIVMLVVSDVYV--LITYASIVESFFIMLSVSAV 423
            .  |..|.||  ||...:   |.:::..|.:|.:::...::.:  ||.||:   ..|||:.:.  
E. coli   301 NPDHYLARLSSRHIPNNA---LNAVLGCCVVSTLVIHALEINLDALIIYAN---GIFIMIYLL-- 357

  Fly   424 LYFRYTRPCMERPIKVAMWIPALFVIVCAFLVVVPIYVAPYEVGMGVLITIIGIPFYYVGVVWKN 488
                    ||....|:......|..:|...|.|:.:.:..:: .:..||.:.|:        |..
E. coli   358 --------CMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWK-SLYALIMLAGL--------WLL 405

  Fly   489 KPK 491
            .||
E. coli   406 LPK 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbNP_651536.1 2A0308 32..515 CDD:273332 105/458 (23%)
yjeHNP_418565.1 PRK11021 8..411 CDD:236823 104/454 (23%)

Return to query results.
Submit another query.