DRSC/TRiP Functional Genomics Resources

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Protein Alignment gb and slif

DIOPT Version :10

Sequence 1:NP_651536.1 Gene:gb / 43265 FlyBaseID:FBgn0039487 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster


Alignment Length:549 Identity:117/549 - (21%)
Similarity:211/549 - (38%) Gaps:131/549 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KAQCREGSAESDSSRVVIKKQLGLLEGVAIILGIIFGSGIFVSPKGVIREVESVGASLVI-WVLC 101
            ||..|..:.:.:.....:.:.|.|.:..|:.:|...|.|::|....|...:  .|.::.| :::.
  Fly     6 KALTRRKTEDVNEGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNI--AGPAVTISFLIA 68

  Fly   102 GLLSMIGALCYAELGTAIPKSGGDYAYIFEAYGSLPAFLYLWDAMMIFVPTT------------- 153
            .:.|....:||||....:||:|..|.|.:...|...||...|:.::.:|..|             
  Fly    69 AIASAFAGICYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGYFDS 133

  Fly   154 ----NAIMGLTFASYVLEPFFGGACEIPKIALQLLAAITICFLTYLNSYYMKVTTKMQNVIMFTK 214
                |....|..:.::...|.|...:.....:.||.|..:.|....:|:       :.|:.....
  Fly   134 LINNNMSKALNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSF-------LNNIFTTVN 191

  Fly   215 IAALVLIILVGLVWMMMGNVENFTRP-------FDNTETDP----GKMSVA---FYSGIFSYAGW 265
            :..:.::::.|   .|..||:|:..|       |......|    |.|:.|   ||    .:.|:
  Fly   192 LVTIAIVLVAG---AMNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFY----GFVGF 249

  Fly   266 NYLNFMTEELRDPYRNLPRAIYISLPLVTGIYVLANVAYLAVLSPSEMI--------------AS 316
            :.:....||..:|.||:|.:|.:||       ::..::|..|.:...|:              |.
  Fly   250 DCIATTGEEAINPKRNIPLSIVVSL-------IIIFLSYFGVSTVLTMMLPYYKQDKDAPFPHAF 307

  Fly   317 NAI-------AVTFGDKILGVFSLIIPLMVAISAFGGLSVHIMTSSRICFVGARNGHMPAILSHI 374
            :::       .||.|    .||:|...|:.|          :....||.:...::|.:...||  
  Fly   308 DSVEWYTIKWIVTIG----AVFALCTSLLGA----------MFPLPRILYAMGKDGILFKRLS-- 356

  Fly   375 SVKSYTPLPSLVFL---CFLSIVMLV--------VSDVYVLITYASIV----------ESFFIML 418
            :|.|||..|.|..:   .|.||:.::        :..:..|:.|..:.          |....::
  Fly   357 TVNSYTKTPLLATIVSGIFASIMAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLV 421

  Fly   419 SVSAVLYFR-------YTRP-CMERPI-KVAMWIPALFVIV-CAFLVVVPIYVAPYEVGMGVLIT 473
            ||.|...||       :..| .|...| ||.:.:.|:|.:| |:...|..:    ...|..|.::
  Fly   422 SVKAPNVFRQFFNGNSFREPNSMTSSITKVGIVVFAIFCLVWCSLQKVFDL----DSTGGIVALS 482

  Fly   474 IIGIPFYYVGVVWKNKPKWVQSTIDSVTF 502
            ::|.....:.||...:|   .|||: :||
  Fly   483 LVGAVLILICVVIGMQP---VSTIE-LTF 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbNP_651536.1 2A0308 32..515 CDD:273332 117/549 (21%)
slifNP_649428.1 2A0303 8..557 CDD:273330 115/547 (21%)

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