DRSC/TRiP Functional Genomics Resources

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Protein Alignment gb and aat-1

DIOPT Version :10

Sequence 1:NP_651536.1 Gene:gb / 43265 FlyBaseID:FBgn0039487 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_501707.1 Gene:aat-1 / 177793 WormBaseID:WBGene00000002 Length:493 Species:Caenorhabditis elegans


Alignment Length:489 Identity:222/489 - (45%)
Similarity:306/489 - (62%) Gaps:9/489 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 EKAQCREGSA----ESDSSRVVIKKQLGLLEGVAIILGIIFGSGIFVSPKGVIREVESVGASLVI 97
            |..:.|||..    |::.....::|.|.|..||::|:|.|.||||||||.||..:..|||.||::
 Worm     6 EPLKSREGDEAPQNETEGKGKGLEKSLTLFNGVSMIVGCIIGSGIFVSPTGVQEQAGSVGLSLIV 70

  Fly    98 WVLCGLLSMIGALCYAELGTAIPKSGGDYAYIFEAYGSLPAFLYLWDAMMIFVPTTNAIMGLTFA 162
            |::.|:.:.|||.|||||||.|.|||||||||.||:|...||:.||...::..|.|..|:.||||
 Worm    71 WLISGIFTAIGAYCYAELGTLIKKSGGDYAYIMEAFGPFVAFIRLWIEAIVVRPCTVTIVALTFA 135

  Fly   163 SYVLEPFFGGACEIPKIALQLLAAITICFLTYLNSYYMKVTTKMQNVIMFTKIAALVLIILVGLV 227
            .|.|.|||.. |..|.:..:|||.:.|..:|.:|...:::.|.:|:.....|:.||.||||.||.
 Worm   136 IYGLRPFFPD-CAPPDVVAELLAILLIVLMTAINCISVRLATIVQDWFTIAKVVALCLIILTGLG 199

  Fly   228 WMMMGN---VENFTRPFDNTETDPGKMSVAFYSGIFSYAGWNYLNFMTEELRDPYRNLPRAIYIS 289
            .:..|.   .::|...|:||..|..|:|:|||||:|:|:|||:|||:.|||::|.||||.||.||
 Worm   200 LLFFGESQYKDSFENIFENTSQDFTKVSLAFYSGLFAYSGWNFLNFIVEELQNPKRNLPLAIAIS 264

  Fly   290 LPLVTGIYVLANVAYLAVLSPSEMIASNAIAVTFGDKILGVFSLIIPLMVAISAFGGLSVHIMTS 354
            :...|.||||.|||....:||.||:.|.|:||.|.:|:.|.|:.|:||.||.|..|..:..|.||
 Worm   265 ITSCTVIYVLTNVALYTAISPDEMLESPAVAVLFANKLYGKFAFIMPLCVACSTIGSANGVIFTS 329

  Fly   355 SRICFVGARNGHMPAILSHISVKSYTPLPSLVFLCFLSIVMLVVS-DVYVLITYASIVESFFIML 418
            :|:.:.|||.|.|||:|:.|:.|:.||:|:::....|||..|:.| |||.||.|..|.....|..
 Worm   330 ARLFYSGAREGQMPAVLTMINKKTKTPIPAVILTGALSIAYLLASKDVYQLINYIQISYWLAIGT 394

  Fly   419 SVSAVLYFRYTRPCMERPIKVAMWIPALFVIVCAFLVVVPIYVAPYEVGMGVLITIIGIPFYYVG 483
            :::|:.:.|.|.|...|||||.:..||:|:..|..||::|:..||.:.|:|:||.:..:|.|.:.
 Worm   395 AIAALFWLRRTMPDASRPIKVPLIWPAIFLAGCIALVLIPMVAAPRDTGIGLLIMLSAVPVYGIF 459

  Fly   484 VVWKNKPKWVQSTIDSVTFTCQKLFMSAKEEKED 517
            :.|||||||....|||.|...|||||...|:|||
 Worm   460 IGWKNKPKWFNEFIDSSTVFIQKLFMVVDEDKED 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbNP_651536.1 2A0308 32..515 CDD:273332 219/485 (45%)
aat-1NP_501707.1 2A0308 2..491 CDD:273332 219/485 (45%)

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