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Protein Alignment CAH9 and Car15

DIOPT Version :9

Sequence 1:	NP_651535.1	Gene:	CAH9 / 43264	FlyBaseID:	FBgn0039486	Length:	311	Species:	Drosophila melanogaster
Sequence 2:	NP_085035.1	Gene:	Car15 / 80733	MGIID:	1931324	Length:	324	Species:	Mus musculus

Alignment Length:	304	Identity:	103/304 - (33%)
Similarity:	153/304 - (50%)	Gaps:	23/304 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 SFLLI-CWSQAVSSHVFGYSEPNQR----RWARHHGHCAGKTQSPIAI---TTSRTTAIHMPAVD 66
            ||||| ..:|..||..:.|...:.:    .|......|.|.|||||.|   ...|...: .|.:
Mouse     9 SFLLIQLAAQVDSSGTWCYDSQDPKCGPAHWKELAPACGGPTQSPINIDLRLVQRDYTL-KPFI- 71

  Fly    67 MIGYHNLLPYPLKMINNGHTVSITIPKVNVTEVGEDFLPYIRGAKLPG-EFEVEGLHFHWGDKNN 130
            ..||.:....|..:.|:||||.:   :||..:..   .|.||||.||. |:.:..||||||...:
Mouse    72 FQGYDSAPQDPWVLENDGHTVLL---RVNSCQQN---CPAIRGAGLPSPEYRLLQLHFHWGSPGH 130

  Fly   131 RGSEHVINDIRYTMEMHIVHRNKKYATIGEALNHPDGAAVLGFFFNLDEDEGAGLVTINRHLHLI 195
            :||||.:::...:||||:||.|.||.::.:|.:.|||.|:|......::.:......|...|..:
Mouse   131 QGSEHSLDEKHGSMEMHMVHMNTKYQSMEDARSQPDGFAILAVLLVEEDRDNTNFSAIVSGLKNL 195

  Fly   196 ADANQEATLNVTFSLSSLI-AGVDVDKFYTYKGSLTTPPCSEAVTWILFPDPIPISPKQISRFRQ 259
            :.......|..||:|:||: :.:.:.::|.|.||||||.|..||.|.:|.:.:||...|:.:|:.
Mouse   196 SSPGVAVNLTSTFALASLLPSALRLLRYYRYSGSLTTPGCEPAVLWTVFENTVPIGHAQVVQFQA 260

  Fly   260 LSDT-----QDGALVDNFRTLQPVGNRRIFARTGHVRHTSIATL 298
            :..|     ....|..|||..||:|.|||.|.......:|::||
Mouse   261 VLQTGPPGLHPRPLTSNFRPQQPLGGRRISASPEASVRSSVSTL 304

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.