DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH9 and car1_predicted

DIOPT Version :9

Sequence 1:NP_651535.1 Gene:CAH9 / 43264 FlyBaseID:FBgn0039486 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001072785.1 Gene:car1_predicted / 780246 -ID:- Length:258 Species:Xenopus tropicalis


Alignment Length:269 Identity:86/269 - (31%)
Similarity:133/269 - (49%) Gaps:27/269 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 HHGHCAGKTQSPIAITTSRTTAIHMPAVDMIGYHNLLPYPLKMINNGHTVSITIPKVNVTEVGED 102
            ||.||....||||.|.|  .||.:.|::..:.:........:::|.||..::....:....|   
 Frog     7 HHKHCLTHHQSPININT--RTAKYNPSLKPLKFSYDPKTAKRIVNVGHCFNVEFEDICDKSV--- 66

  Fly   103 FLPYIRGAKLPGEFEVEGLHFHWGDKNNRGSEHVINDIRYTMEMHIVHRN-KKYATIGEALNHPD 166
                :....|.|.:.:...|||||..:..||||.|:...|..|:||||.| |||.:..||..|||
 Frog    67 ----LSEGPLDGHYRLCQFHFHWGSSDRDGSEHNIDGHLYPAELHIVHWNSKKYTSFAEAAKHPD 127

  Fly   167 GAAVLGFFFNLDEDEGAGLVTINRHLHLIADANQEATLNVTFSLSSLIAGVDVDKFYTYKGSLTT 231
            |.||:|.|..|.....| |.:|..:|..:....:.... ..|.|:.|:. .|:: ::||.|||||
 Frog   128 GVAVVGVFLKLGNTNPA-LQSIIENLDKVKTKGKACPF-TEFHLNGLLP-EDLN-YWTYMGSLTT 188

  Fly   232 PPCSEAVTWILFPDPIPISPKQISRFRQLSDTQDGA----LVDNFRTLQPVGNRRIFARTGHVRH 292
            .|..|.||||:..:.|.:|.:|:.:||:|..|.:..    :::|.|.:||:.:|.::        
 Frog   189 KPYFECVTWIILQEAITVSSQQLEQFRRLQCTSENENPSFILENHRPVQPLDHRVVY-------- 245

  Fly   293 TSIATLKHE 301
             |...:||:
 Frog   246 -SSCPVKHK 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH9NP_651535.1 Carb_anhydrase 25..282 CDD:215000 82/248 (33%)
car1_predictedNP_001072785.1 alpha_CA 16..247 CDD:381753 79/252 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.