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Protein Alignment CAH9 and Car13

DIOPT Version :9

Sequence 1:	NP_651535.1	Gene:	CAH9 / 43264	FlyBaseID:	FBgn0039486	Length:	311	Species:	Drosophila melanogaster
Sequence 2:	NP_078771.1	Gene:	Car13 / 71934	MGIID:	1931322	Length:	262	Species:	Mus musculus

Alignment Length:	276	Identity:	92/276 - (33%)
Similarity:	128/276 - (46%)	Gaps:	37/276 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 FGYSEPN-QRRWARHHGHCAGKTQSPIAITTSRTTAIHMPAVDMIGYHNLL--------PYPLKM 80
            :||.|.| ...|........|..||||.|.|..           :.|.:.|        |...|:
Mouse     6 WGYGEHNGPIHWNELFPIADGDQQSPIEIKTKE-----------VKYDSSLRPLSIKYDPASAKI 59

  Fly    81 I-NNGHTVSITIPKVNVTEVGEDFLPYIRGAKLPGEFEVEGLHFHWGDKNNRGSEHVINDIRYTM 144
            | |:||:.::.........|       :||..|.|.:.:...|.|||..::.|||||::.:||..
Mouse    60 ISNSGHSFNVDFDDTEDKSV-------LRGGPLTGNYRLRQFHLHWGSADDHGSEHVVDGVRYAA 117

  Fly   145 EMHIVHRNK-KYATIGEALNHPDGAAVLGFFFNLDEDEGAGLVTINRHLHLIADANQEATLNVTF 208
            |:|:||.|. ||.:..||.:..||.||||.|..:.| ....|..|...|..|.:..::.......
Mouse   118 ELHVVHWNSDKYPSFVEAAHESDGLAVLGVFLQIGE-HNPQLQKITDILDSIKEKGKQTRFTNFD 181

  Fly   209 SLSSLIAGVDVDKFYTYKGSLTTPPCSEAVTWILFPDPIPISPKQISRFRQLSDTQDGA----LV 269
            .|..|.:..|   ::||.||||.||..|:||||:...||.||.:|::|||.|..|.:|.    |:
Mouse   182 PLCLLPSSWD---YWTYPGSLTVPPLLESVTWIVLKQPISISSQQLARFRSLLCTAEGESAAFLL 243

  Fly   270 DNFRTLQPVGNRRIFA 285
            .|.|..||:..||:.|
Mouse   244 SNHRPPQPLKGRRVRA 259

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.