DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH9 and ptprga

DIOPT Version :10

Sequence 1:NP_651535.1 Gene:CAH9 / 43264 FlyBaseID:FBgn0039486 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001316793.1 Gene:ptprga / 561197 ZFINID:ZDB-GENE-101101-4 Length:1414 Species:Danio rerio


Alignment Length:260 Identity:83/260 - (31%)
Similarity:127/260 - (48%) Gaps:22/260 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 WARHHGHCAGKTQSPIAITTSRT-TAIHMPAVDMIGYHNLLPYPLKMINNGHTVSITIPKVNVTE 98
            ||.....|..:.||||.|....| .::....:.:.|:.........|.|.|.||:|.:.      
Zfish    71 WAAAFPECQERNQSPINIADQDTKVSMEYQELTLDGFDAESSNKTSMKNTGKTVAIFLK------ 129

  Fly    99 VGEDFLPYIRGAKLPGEFEVEGLHFHWGDKN-NRGSEHVINDIRYTMEMHI-VHRNKKYATIGEA 161
              :|:  ::|||.|||.|:.|.:.||||..| :.||||.||..|:.:||.| ::.:..:.::..|
Zfish   130 --DDY--FVRGAGLPGRFKAEKVEFHWGQSNGSDGSEHSINGRRFPVEMQIFMYNSDDFDSLNTA 190

  Fly   162 LNHPDGAAVLGFFFNLDEDEGAGLVTINRHLHLIADANQEATLNVTFSLSSLIAGVDVDKFYTYK 226
            :......|.:..||.:|..:...:..|...|..:....:|..|. .|.|..|:.. .:..:|.|.
Zfish   191 IREKRVIAAMAVFFQVDFKDNPAVDPIIHGLRGVVHHEKETFLE-PFVLRDLLPS-SIGSYYRYI 253

  Fly   227 GSLTTPPCSEAVTWILFPDPIPISPKQISRFRQL--SDTQDGA-----LVDNFRTLQPVGNRRIF 284
            |||||||||:.|.||:|..|:.:|.||:..|..:  ::.||..     |.:|||.||.:.||.:|
Zfish   254 GSLTTPPCSKVVEWIVFSRPVLLSYKQLEAFYSIFTTEQQDHVKSVEYLRNNFRPLQSLDNREVF 318

  Fly   285  284
            Zfish   319  318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH9NP_651535.1 Carb_anhydrase 31..286 CDD:459707 83/260 (32%)
ptprgaNP_001316793.1 alpha_CARP_receptor_like 71..319 CDD:239396 83/260 (32%)
FN3 348..426 CDD:214495
R-PTPc-G-1 817..1090 CDD:350505
R-PTP-G-2 1174..1378 CDD:350508
Blue background indicates that the domain is not in the aligned region.

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