back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CAH9 and Car3

DIOPT Version :9

Sequence 1:	NP_651535.1	Gene:	CAH9 / 43264	FlyBaseID:	FBgn0039486	Length:	311	Species:	Drosophila melanogaster
Sequence 2:	NP_031632.2	Gene:	Car3 / 12350	MGIID:	88270	Length:	260	Species:	Mus musculus

Alignment Length:	274	Identity:	84/274 - (30%)
Similarity:	127/274 - (46%)	Gaps:	34/274 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 FGYSEPN-QRRWARHHGHCAGKTQSPIAITTSRTTAIHMPAVDMIGYHNLLPYPLK--------M 80
            :||:..| ...|...:....|..||||.:.|....  |.|        :|.|:...        :
Mouse     5 WGYASHNGPDHWHELYPIAKGDNQSPIELHTKDIK--HDP--------SLQPWSASYDPGSAKTI 59

  Fly    81 INNGHTVSITIPKVNVTEVGEDFLPYIRGAKLPGEFEVEGLHFHWGDKNNRGSEHVINDIRYTME 145
            :|||.|..:.........:       :||..|.|.:.:...|.|||..::.||||.::.::|..|
Mouse    60 LNNGKTCRVVFDDTYDRSM-------LRGGPLSGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAE 117

  Fly   146 MHIVHRNKKYATIGEALNHPDGAAVLGFFFNLDEDEGAGLVTINRHLHLIADANQEATLNVTFSL 210
            :|:||.|.||.|.||||..|||.||:|.|..:..::|...:.::. |..|....:||.. ..|..
Mouse   118 LHLVHWNPKYNTFGEALKQPDGIAVVGIFLKIGREKGEFQILLDA-LDKIKTKGKEAPF-THFDP 180

  Fly   211 SSLIAGVDVDKFYTYKGSLTTPPCSEAVTWILFPDPIPISPKQISRFRQLSDTQDG----ALVDN 271
            |.|...  ...::||.||.|||||.|.:.|:|..:|:.:|..|:::.|.|..:.:.    .||.|
Mouse   181 SCLFPA--CRDYWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLFSSAENEPPVPLVGN 243

  Fly   272 FRTLQPVGNRRIFA 285
            :|..|||..|.:.|
Mouse   244 WRPPQPVKGRVVRA 257

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.