DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eater and ltbp3

DIOPT Version :9

Sequence 1:NP_651533.3 Gene:eater / 43262 FlyBaseID:FBgn0243514 Length:1074 Species:Drosophila melanogaster
Sequence 2:NP_001244070.1 Gene:ltbp3 / 562912 ZFINID:ZDB-GENE-060526-130 Length:1258 Species:Danio rerio


Alignment Length:1100 Identity:254/1100 - (23%)
Similarity:370/1100 - (33%) Gaps:392/1100 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 CCKGYKKVRSSALRCLAQCKVN--CGSGFC--TKPNV-CTCKKGYVNLNNDPSNRCVP------Y 94
            |.:|||::.|:..:.:.:|.::  |.:|.|  |:.:. ||||.|||....   .|||.      |
Zfish   276 CPQGYKRLNSTHCQDINECMMSGVCWNGECLNTRGSFRCTCKPGYVLKER---TRCVAATVELGY 337

  Fly    95 C--KGCSRGTCQ-------SPGRCICSARHLLDKTTNNCIPQCASGCPNGTCITPNNCSCNKGYK 150
            |  .....|.|:       |...|.|:...........| ||      :||......|...||..
Zfish   338 CFRMVTETGKCEHALSTRLSQEMCCCTVGKAWGSNCERC-PQ------DGTASFNKICPAGKGMS 395

  Fly   151 L-------------------NPTTQ-----------------------------VCLPT------ 161
            |                   ||.|:                             |..||      
Zfish   396 LQTYHGTLTFQPFLTSIEHINPDTEVKPPEVPIQTTTPMHLSPISTHGPRRPVIVAKPTTPPIVL 460

  Fly   162 --------------------CKDN--------CA-AVNGFCAAPNRCECNPGFIPKPKSKSFECQ 197
                                ||.|        || ..|||     .|.|.||:.....:|..|.:
Zfish   461 VPPEADSHEVSQTQVSPMDECKLNSNICGHGVCANTQNGF-----MCHCYPGYRSHALTKRCEDE 520

  Fly   198 PKC-KNGCSNGVC---RAPDKCECNKFYE-KDIDG---NCVPICENGCVN-------GNCTAPD- 246
            .:| ...|..|||   ....||.|:..|. .:|..   :|..|  |.|:|       |.|.... 
Zfish   521 NECDAQPCGRGVCLNVLGSYKCNCHHGYRLSEISSGKRSCSDI--NECLNTEICGVGGQCINQQG 583

  Fly   247 --VCQCLTGY----TKIGH----NVCLA--VCP-EGCQNGVCVAPNEC-SCNAGYTKLEGVCTPV 297
              .|:||.|:    .|..|    |.||.  :|| |.|:|  .:...|| .|..||....|||..:
Zfish   584 SYKCECLPGFRKKIQKPPHCEDINECLEPDICPNEQCEN--TLGSYECLPCQPGYRAERGVCHDI 646

  Fly   298 --CKDG--CVNGFC---ASPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCDEGYIKG 355
              ||..  |:||.|   |...:|.||:|:..::..:       ||::                  
Zfish   647 DECKKHGVCLNGRCENLAGSYRCLCNEGFLPEANRK-------GCRD------------------ 686

  Fly   356 TGNSCKPICSKGCENGFC---DAPEKCSCNDGYEMDGE-NRCSPV--C--SGGCKNGFCV---AP 409
             .|.|:.  ::.|.||.|   |...:|.|..||:...| :.|..:  |  :..|:.|.|:   ..
Zfish   687 -INECQD--NRLCANGHCINTDGSFRCQCYAGYQPTQEGSHCEDINECKRAANCQRGRCINTMGS 748

  Fly   410 GKCSCDEGYSKETGNSCKPICSKGCE--------NGFCDAPE---KCSCNDGYEM-DSENRCSPV 462
            .:|.|.:||:.|.|..||.|  ..|:        :|.|:..:   .|.||||:.: :.::.|..:
Zfish   749 YRCECQKGYTLENGRHCKDI--NECDGERSLCQPHGVCENRQGGYVCVCNDGFRLSEDKHSCEKI 811

  Fly   463 CSG--GC-----KNGFC-------VAPGKCSCDEGYSKETGNSCK-------------PICSKGC 500
            .|.  .|     ...||       |...:|.|..|..  .|:.|:             .:|..| 
Zfish   812 ESDKKECYLNLDDTVFCDSVLATNVTKQECCCSIGVG--WGDHCEIYPCPVYRSAEYHSLCPIG- 873

  Fly   501 ENGFCDAPEKCSCNDGYEMDGE-NRCSPVCSGGCKNGFCVAPE---KCSCDEGYSKETG------ 555
             .||....||...  |:....: :.|....:..||.|.|:..:   :|.|.:|:..::.      
Zfish   874 -RGFYHDQEKIEY--GFVAHRDIDECVLFSNEICKEGRCMNTQPGFECYCQQGFYYDSNLLECID 935

  Fly   556 -NSC--KPICSNG-CENG------FCDAP-------EKC---------SCNDGYEMDGENRCSPV 594
             :.|  :.:|.|| |.|.      .||.|       :||         .|.|             
Zfish   936 VDECHDESLCINGHCVNTRGSFYCVCDPPWVPDAYNKKCVFPTIIGIDECQD------------- 987

  Fly   595 CSGGCKNGFCVAPGKCSCDEGYSKETGNS----CKPICSKGCENGFCDAPEKCSCN--DGYEMDS 653
             ...||||.||             .|.:|    |.|..:...:...|..||:.:..  ....:..
Zfish   988 -PANCKNGQCV-------------NTQDSYYCLCSPPWTLASDRNSCVTPEEQAVMGVSVVHLTD 1038

  Fly   654 ENRCSPVCSGGCKNGFCI-APGKCSCDEGYSKETGNSCKPICSKGCENGFCDAPEKCSCNDG--- 714
            .|.|..  ...|:||.|: .||...|              ||::...  |..|.::|..:|.   
Zfish  1039 VNECED--PSYCRNGRCVNTPGSFHC--------------ICTQPLT--FSAALKQCVYDDRTAA 1085

  Fly   715 ------YEMDSENRCS-PVCSGGCKNGFCVAPGKCSCDEGYSKETGNSCK--PICSKGCENGFCE 770
                  .|:|.::.|: |      :|...|...:|.|.  |.:..|..|:  |:.:....|..||
Zfish  1086 HKDICFQEVDEDHMCTMP------RNELTVTYSECCCH--YGRGWGPECRTCPMRNTVLFNRLCE 1142

  Fly   771 APEKCSCNDGYEMDGENRCSPVCSGGCKNGFCIAPGKCSCDEGYSRETGNSCKPICSKGCENGFC 835
            ...:.      |.|||            ..|..|....:.:...|.|..:.|      .|.||.|
Zfish  1143 MHLET------ESDGE------------GDFLAAFSTYNPEGDSSEEDSDEC------SCANGRC 1183

  Fly   836 DAP---EKCSCNDGYEMD-SENRCSPV--CSG------GCKNGFCV---APGKCSCDEGY 880
            ...   ..|.||.|:.:| |..||:.:  |:|      .|||..|:   ...:|.|..|:
Zfish  1184 VRSYLGTMCECNTGFVLDHSRTRCTDIDECAGRGTGQSPCKNARCINTFGSFRCQCKLGF 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eaterNP_651533.3 None
ltbp3NP_001244070.1 EGF_CA 290..>320 CDD:214542 9/29 (31%)
TB 348..382 CDD:279073 8/40 (20%)
EGF_CA 562..594 CDD:214542 10/33 (30%)
EGF_CA 605..640 CDD:214542 13/36 (36%)
EGF_CA 645..>675 CDD:214542 10/29 (34%)
EGF_CA 686..726 CDD:214542 12/60 (20%)
EGF_CA 727..766 CDD:214542 10/38 (26%)
EGF_CA 767..809 CDD:214542 9/43 (21%)
TB 828..865 CDD:279073 7/38 (18%)
EGF_CA 935..>965 CDD:214542 8/29 (28%)
EGF_CA 982..1012 CDD:214542 12/56 (21%)
EGF_CA 1038..>1064 CDD:214542 9/41 (22%)
TB <1109..1135 CDD:279073 7/27 (26%)
EGF_CA 1209..>1243 CDD:214542 8/33 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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