DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment eater and Scarf2

DIOPT Version :9

Sequence 1:	NP_651533.3	Gene:	eater / 43262	FlyBaseID:	FBgn0243514	Length:	1074	Species:	Drosophila melanogaster
Sequence 2:	XP_038944006.1	Gene:	Scarf2 / 287949	RGDID:	1306013	Length:	838	Species:	Rattus norvegicus

Alignment Length:	522	Identity:	139/522 - (26%)
Similarity:	187/522 - (35%)	Gaps:	174/522 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly   242 CTAP--DVCQCLTGYTKIGHNVCLAVCPEG---C-QNGVCVAPNECSCNAGY--TKLEGVCT--- 295
            |..|  .|..|..|:.::|....:||| ||   | :|.|||.|.||.|..||  ...:..|.
  Rat    46 CRTPGSQVLTCCAGWRQLGDECGIAVC-EGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQF 109

  Fly   296 --PVCKDGCVNGFCASPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPGKCSCDEGYIKGTGN 358
              |.||           |:|||:.              .|.|::    ..|:|:|   :.:..|.
  Rat   110 WGPDCK-----------ERCSCHP--------------HGQCED----VTGQCTC---HARRWGA 142

  Fly   359 SCKPICSKGCENGFCDAPEKCSCNDGYEMDGENRCSP-----VCSGGCKNGFCVA-------PGK 411
            .|:..|.  |::|.|. |...:|          ||.|     .|:..|   :|.|       .|.
  Rat   143 RCEHACQ--CQHGTCH-PRSGAC----------RCEPGWWGAQCASAC---YCSATSRCDPQTGA 191

  Fly   412 CSCDEGYSKETGNSCKPICSKGCENGFCDAPE-KCSCNDGYEMDSENRCSPVCSGGCKNGFC-VA 474
            |.|..|:   .|.||...||  |.:..|:... :|.|.   |.....||...|.  |..|.| ..
  Rat   192 CLCHAGW---WGRSCNNQCS--CNSSPCEQQSGRCQCR---ERTFGARCDRYCQ--CFRGRCHPV 246

  Fly   475 PGKCSCDEGYSKETGNSCKPICSKGCENGFCDAPEKCSCNDGYEMDGENRCSPVCSGGCKNGFCV 539
            .|.|:||.||..:       .|.:.|..||            |.:....||          |.|.
  Rat   247 DGTCACDPGYRGK-------YCREPCPAGF------------YGLGCRRRC----------GQCK 282

  Fly   540 APEKCSCDEGYSKETGNSCKPICSNGCENGFCDAPEKCSCNDGYEMDG-ENRCSPVCSGGCKNGF 603
            ..:.|:..||...    :|:|    |.....||.|    |..|:..:| .:||.|     |::|.
  Rat   283 GQQPCTVVEGRCL----TCEP----GWNGTKCDQP----CATGFYGEGCGHRCPP-----CRDGH 330

  Fly   604 CV--APGKCS-CDEGYSKETGNSCKPICSKGCENGFCDAPEKCSCNDGYEMDSENRCSPVCSGGC 665
            ..  ..|||: |:.|:   .|:.|:..||.|.                |..|    |:.||| .|
  Rat   331 ACNHVTGKCTHCNAGW---IGDRCETKCSNGT----------------YGED----CAFVCS-DC 371

  Fly   666 KNGFC-IAPGKCSCDEGYSKETGNSCKPICSKGCENGFCDAPEKCSCNDGYEMDSENRCSPVCSG 729
            .:|.| ...|:|.|..|..   |..|...|..|...  .|..:.|||:       |..|.|| :|
  Rat   372 GSGHCDFQSGRCLCSPGVH---GPHCNVTCPAGLHG--VDCAQACSCH-------EESCDPV-TG 423

  Fly   730 GC 731
            .|
  Rat   424 AC 425

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
eater	NP_651533.3	None
Scarf2	XP_038944006.1	exchanger_TraA	<74..431	CDD:411343	129/493 (26%)
Scarf2	XP_038944006.1	PHA03247	<683..837	CDD:223021
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1218
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900