DRSC/TRiP Functional Genomics Resources

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Protein Alignment eater and Vegfc

DIOPT Version :9

Sequence 1:NP_651533.3 Gene:eater / 43262 FlyBaseID:FBgn0243514 Length:1074 Species:Drosophila melanogaster
Sequence 2:NP_446105.1 Gene:Vegfc / 114111 RGDID:619800 Length:415 Species:Rattus norvegicus


Alignment Length:321 Identity:79/321 - (24%)
Similarity:107/321 - (33%) Gaps:90/321 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 CVPY--CKGCSRGTCQSPG-RCICSARHLLDKTTNNCIPQCASGCPNGTCITPNNCSCNKGYKLN 152
            ||..  |.||    |.|.| :|:.::...|.||........:.|....|....|:.||....||:
  Rat   152 CVSVYRCGGC----CNSEGLQCMNTSTGYLSKTLFEITVPLSQGPKPVTISFANHTSCRCMSKLD 212

  Fly   153 PTTQV------CLPTCKDNCAAVNGFCAA-----PNRCECNPGFIPKPKSKSFECQPKCKNGCSN 206
            ...||      .||.....|.|.|..|.|     ...|:|       ...:.|......::..||
  Rat   213 VYRQVHSIIRRSLPATLPQCQAANKTCPANYVWNNYMCQC-------LAQQDFIFYSNVEDDSSN 270

  Fly   207 GVCRAPDKCECNKFYEKDIDGNCVPICENGCVNGNCTAP------DVCQCLTGYTKIGHNVCLAV 265
            |.   .|.|..||..::|   .|..:|:.|....:| .|      |.|||:              
  Rat   271 GF---HDVCGPNKELDED---TCQCVCKGGLRPSSC-GPHKELDRDSCQCV-------------- 314

  Fly   266 CPEGCQNGVCVAPNECSCNAGYTKLEGVCTPVCKDGCVNGFCASPEKCSCNDGYEMDSENRCSPV 330
                |:|.:.:  |.|..|..:.  |..|..|||..|......:|.||:|.              
  Rat   315 ----CKNKLFL--NSCGANREFD--ENTCQCVCKRTCPRNQPLNPGKCACE-------------- 357

  Fly   331 CSGGCKNGFCVAPGK------CSCDEGYIKGTGNSCKPICSKGCENGFCDAPEKCSCNDGY 385
            |:...:.  |...||      |||   |.:...|..     |.|:.|...:.|.|.|...|
  Rat   358 CTENTQK--CFLKGKKFHHQTCSC---YRRPCTNRL-----KHCDPGLSFSEEVCRCVPSY 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eaterNP_651533.3 None
VegfcNP_446105.1 PDGF 127..207 CDD:278756 17/58 (29%)
4 X 16 AA repeats of C-X(10)-C-X-C-X(1,3)-C 276..358 28/121 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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