DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep5 and nep-17

DIOPT Version :9

Sequence 1:NP_733186.2 Gene:Nep5 / 43255 FlyBaseID:FBgn0039478 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_001254395.1 Gene:nep-17 / 174996 WormBaseID:WBGene00010070 Length:1589 Species:Caenorhabditis elegans


Alignment Length:820 Identity:196/820 - (23%)
Similarity:336/820 - (40%) Gaps:193/820 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 YAMDEQT--DPCEDFYQFTCGRWANEHPRPDSVTSNDWFRERQAHIMRVVREF----LRSNITKS 202
            ||....|  |||:|||.:.||.: |:        |..::..|..:::.:.::.    .::.|..|
 Worm   876 YAKSVNTAIDPCDDFYSYACGNF-NQ--------SVSFYTARAQNLVYMAQKLEDPTYQTTINSS 931

  Fly   203 EPEAVGKAKTMYRACM---------DTKLLDKR-------DLEPLINY---LLRFGLPVLPSALN 248
              .|:.|.|.:|.||:         |..|:.|.       ||:.||..   |:..|.|.||||..
 Worm   932 --PALKKEKQLYNACLTATASSQSEDQILISKNYIQTKVDDLKTLIGQDFTLVNGGAPKLPSAKQ 994

  Fly   249 LTLGSGSKYATEAANVKYNWLQSIVSIKQHLTMDLIIGFDVFPDPFNRTINRIALGTPETDSAFP 313
              :|....|               :|.:|        |.|....|...|              :.
 Worm   995 --IGDALGY---------------LSFEQ--------GIDTLISPLVDT--------------YW 1020

  Fly   314 FNNDDSHKMLRKIHRKTIFMQNSDDEDDSEDDRESEEEEAAKQTSTGMTAYLHYVRKVIEKYLLY 378
            .:|...::|.  |.:.|.::.            ::..:.||.:..  ...||.....|:.:|   
 Worm  1021 IDNSKGYQMF--IDQNTAYLS------------KTYYQPAAWKIE--KPKYLKMALDVVTRY--- 1066

  Fly   379 VDPNVNQEEATL--GITELV------KQGVRVARKV-----HEFKEEAENMTKPSKNPADDIVYI 430
                ..::..||  |.::|:      :|.:.|....     .:| :.:.|:||.|     |:|  
 Worm  1067 ----AREQNITLPAGASDLLSNVLDYEQNIAVKYSTDDNTRRQF-QRSWNLTKTS-----DLV-- 1119

  Fly   431 TLQDLQNQTDKNIAPKTLPIWVRYMELILKGTRHAGNIQMTQ----NLTIITSQAD-ITYLQNIV 490
                    |..|...     |:.|:.       ||.|....:    |..:...:.| :|:..  .
 Worm  1120 --------TKYNFMD-----WMTYLS-------HAPNAVKAKITDANYQVSVMEVDRLTHFS--A 1162

  Fly   491 EYLDDTP---------------ASHIESY--LFLSTIEELVLHTSSSMRLLHSEYMRVAIGTEGS 538
            :||..:|               |.:|.||  .|....:|.:....|..:.:.:.........|.:
 Worm  1163 DYLQQSPELLVNLLFVRLLLGNAQYIPSYASAFRGMTDESIFLGLSRRKTIPNHIPPPNFDLEAN 1227

  Fly   539 TPRSLYCANGVNSLLGMAVSYVLADADF-TKEKLPKVER----MLSDIRRSFDRLVKSTSWMDAA 598
            .|.   ||:..|:|:..|...|..|..: |.:.:..:.:    ::.::..||..::....||...
 Worm  1228 GPA---CASVANNLMQFANGRVFVDYMYPTAQDVTNIRKSAGGIIKNVISSFQGMIDQLDWMAPD 1289

  Fly   599 TKRKTIQKSAEMKSFIGFPPWLRNASVLNAYYEGAEVNASTHLENLMD-------FVHWQMMDKL 656
            ||:|...|:.:::..|.||.|::|.::|..||....:..|.:..::.|       ||.:..::..
 Worm  1290 TKQKAYAKTVQIQQNIAFPDWIKNDTLLGNYYSTLVIADSDNFYDIYDKLIKFNIFVQYNQLNAA 1354

  Fly   657 NEMDKPEPIGWATSPSNVNAFHTFQSNAITVPIAILQYPFYDLGL-EALNYGSIGTILGHELTHG 720
             :.|:.:.:|   .|..|||::..:.|:||.|..||..|:::... .::|||.:|.:.|||||||
 Worm  1355 -QTDRTDFLG---QPGTVNAWYQPELNSITFPAGILVPPYFNPNWPPSINYGGMGLVAGHELTHG 1415

  Fly   721 FDDSGRRFDRAGNMVEWWSNRTIDEYVNRTECFVEQYSRYHLADIDEY----IDGELTLGENIAD 781
            |||.|.::...||:..|..:.::..:.|.::|.:.:||.:...:...|    :.|..|.||||||
 Worm  1416 FDDQGVQWGPTGNLARWMDDNSMAGFKNMSQCVINEYSGFCPLNATNYSPNCVKGPQTQGENIAD 1480

  Fly   782 NGGMREAFYAYRLYVKEVGRERSKLPG--LEHYSHEQLFFISFGNLWCETYTPAASRYA--LTDS 842
            |||:..||.||:.:....|.: .:||.  ...::|:||||:||..:|||......:.|.  :.|.
 Worm  1481 NGGVHAAFNAYKTHQSLDGPD-PRLPDRLFGQFTHDQLFFMSFAQVWCEVRRTDDALYTQIMVDP 1544

  Fly   843 HCPGQMRLRGVLSNSEEFARTFKCARGTPMNPDQPKCRIW 882
            |.|...|:.|.:.|...|...|.|..|:...|:| .|.:|
 Worm  1545 HSPSMYRVYGTIQNFPAFQTAFNCPLGSKSAPEQ-HCEVW 1583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep5NP_733186.2 PepO 146..882 CDD:226118 193/816 (24%)
M13 151..880 CDD:189000 191/807 (24%)
nep-17NP_001254395.1 PepO 108..833 CDD:226118
M13 112..830 CDD:189000
PepO 880..1583 CDD:226118 193/814 (24%)
M13 884..1581 CDD:189000 191/808 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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