DRSC/TRiP Functional Genomics Resources

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Protein Alignment RYa-R and Npffr1

DIOPT Version :9

Sequence 1:NP_001287552.1 Gene:RYa-R / 43253 FlyBaseID:FBgn0004842 Length:518 Species:Drosophila melanogaster
Sequence 2:XP_006256547.1 Gene:Npffr1 / 64107 RGDID:621570 Length:468 Species:Rattus norvegicus


Alignment Length:377 Identity:118/377 - (31%)
Similarity:179/377 - (47%) Gaps:47/377 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IRPDPASLIYNTTALPADDEGSNYGYGSTTTLSGLQFETYNITVMMNFSCDDYDLLSEDMWSSAY 103
            |.||..:..  ..|.|:.....::..|.    :|...|| :|...:.|              |:|
  Rat    28 IGPDSCAPF--APAEPSQPPNGSWPLGQ----NGSDVET-SIATSLTF--------------SSY 71

  Fly   104 FK------IIVYMLYIPIFIFALIGNGTVCYIVYSTPRMRTVTNYFIASLAIGDILMSFFCVPSS 162
            ::      .:....|:.||:..::||..||:||.....||||||.||.:||:.|:|:..||:|::
  Rat    72 YQHSSPVAAMFIAAYVLIFLLCMVGNTLVCFIVLKNRHMRTVTNMFILNLAVSDLLVGIFCMPTT 136

  Fly   163 FISLFILNYWPFGLALCHFVNYSQAVSVLVSAYTLVAISIDRYIAIMWPLKPRITKRYATFIIAG 227
            .:...|.. |||..|.|......|.:||..|.:|||||:::|:..|:.|.:.::|.|.|.|.||.
  Rat   137 LVDNLITG-WPFDNATCKMSGLVQGMSVSASVFTLVAIAVERFRCIVHPFREKLTLRKALFTIAV 200

  Fly   228 VWFIALATALPIPIVSGLDIPMSPWHTKCEK-------YICREMWPSRTQEYYYTLSLFALQFVV 285
            :|.:||....|..:.  |.:.....|...:.       |.|.|.||.:.....||..|||..::|
  Rat   201 IWALALLIMCPSAVT--LTVTREEHHFMLDARNRSYPLYSCWEAWPEKGMRKVYTAVLFAHIYLV 263

  Fly   286 PLGVLIFTYARITIRVWAKRPPGEAETNRDQ-----RMARSKRKMVKMMLTVVIVFTCCWLPFNI 345
            ||.:::..|.||..::.  :.||.|....:.     |.:|.:.::|.|::.|.:.||..|||..:
  Rat   264 PLALIVVMYVRIARKLC--QAPGPARDTEEAVAEGGRTSRRRARVVHMLVMVALFFTLSWLPLWV 326

  Fly   346 LQLLLNDEEFAHWDPLPYVWFAF---HWLAMSHCCYNPIIYCYMNARFRSGF 394
            |.||::..|.:.........:||   ||||..|...|||||.|.|..||.||
  Rat   327 LLLLIDYGELSELQLHLLSVYAFPLAHWLAFFHSSANPIIYGYFNENFRRGF 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RYa-RNP_001287552.1 7tm_4 113..>234 CDD:304433 49/120 (41%)
7tm_1 122..383 CDD:278431 94/275 (34%)
Npffr1XP_006256547.1 7tm_4 90..>209 CDD:304433 49/119 (41%)
7tm_1 96..367 CDD:278431 94/275 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9048
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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