DRSC/TRiP Functional Genomics Resources

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Protein Alignment RYa-R and npffr2a

DIOPT Version :9

Sequence 1:NP_001287552.1 Gene:RYa-R / 43253 FlyBaseID:FBgn0004842 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_001098579.1 Gene:npffr2a / 560955 ZFINID:ZDB-GENE-060526-183 Length:422 Species:Danio rerio


Alignment Length:430 Identity:136/430 - (31%)
Similarity:213/430 - (49%) Gaps:84/430 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 MNFSCD-DYDLLSEDMW-----SSAYF------KIIVYML------------YIPIFIFALIGNG 124
            ||.|.| :..|:.:..|     ||.:|      ..:.|.|            |:.||:..:||||
Zfish     1 MNESLDLNITLVDDGNWTFINGSSEFFLPLNNITYVGYYLHQPSVAAVFIVSYLLIFLVCMIGNG 65

  Fly   125 TVCYIVYSTPRMRTVTNYFIASLAIGDILMSFFCVPSSFISLFILNYWPFGLALCHFVNYSQAVS 189
            .||:||..:..||||||.||.:|||.|:|:..||:|::.:. .|:..||||..:|......|.:|
Zfish    66 VVCFIVLRSKNMRTVTNLFILNLAISDLLVGIFCMPTTLLD-NIITGWPFGSMVCKMSGMVQGIS 129

  Fly   190 VLVSAYTLVAISIDRYIAIMWPLKPRITKRYATFIIAGVWFIALATALPIPIVSGLDIPM----- 249
            |..|.:|||||::||:..|::|.|.::|...|||||..:|.:|::...|    ||:.:.:     
Zfish   130 VSASVFTLVAIAVDRFRCIVYPFKQKLTISTATFIIVIIWVLAVSIMCP----SGVMLQVTKEQN 190

  Fly   250 ----------SPWHTKCEKYICREMWPSRTQEYYYTLSLFALQFVVPLGVLIFTYARITIRVWAK 304
                      ||:      |.|||.||::.....||..|||..::.||.:::..||||.|.::..
Zfish   191 IRVFRGNNRSSPF------YWCRENWPNQEMRKIYTTVLFANIYLAPLSLIVIMYARIGITLFKT 249

  Fly   305 RPPGEAETNRDQR--MARSKRKMVKMMLTVVIVFTCCWLPFNILQLL-----LNDEEFAHWDPLP 362
            ..|...:...|.|  :::.|::::||:|.|.::|...|||...|.:|     |.:.::...:  .
Zfish   250 AMPAGGKHGHDNRHSVSKKKQRVIKMLLIVALLFILSWLPLWTLMMLTDYVKLTEHQYRVIN--I 312

  Fly   363 YVWFAFHWLAMSHCCYNPIIYCYMNARFRSGFVQLMHRMPGLRRWCCLRSVGDRMNATSGEMTTK 427
            |::...||||..:...|||||.:.|..||.|| |.:.:. ||    |  .||       |:..|.
Zfish   313 YIYPFAHWLAFFNSSVNPIIYGFFNENFRRGF-QAIFKF-GL----C--PVG-------GQHRTY 362

  Fly   428 YHRHVGDALFRKP--------KICIRNGSSTSSQSNEHIH 459
            .||..|:::  :|        .|.:.:..:.||:...||:
Zfish   363 SHRVQGNSV--QPVNLQPSTEPISLNSLENNSSRRMNHIN 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RYa-RNP_001287552.1 7tm_4 113..>234 CDD:304433 54/120 (45%)
7tm_1 122..383 CDD:278431 97/282 (34%)
npffr2aNP_001098579.1 7tm_4 57..>184 CDD:304433 56/131 (43%)
7tm_1 63..333 CDD:278431 97/282 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3897
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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