Protein Alignment RYa-R and RGD1560028

DIOPT Version :9

• Sequence 1: NP_001287552.1
• Gene: RYa-R / 43253
• FlyBaseID: FBgn0004842
• Length: 518
• Species: Drosophila melanogaster
• Sequence 2: NP_001102709.1
• Gene: RGD1560028 / 500157
• RGDID: 1560028
• Length: 415
• Species: Rattus norvegicus
• Alignment Length: 375
• Identity: 104/375 - (27%)
• Similarity: 173/375 - (46%)
• Gaps: 24/375 - (6%)

  Fly   115 IFIFALIGNGTVCYIVYSTPRMRTVTNYFIASLAIGDILMSFFCVPSSFISLFILNYWPFGLALC 179
            ||..||.||..|.|:|..:..||||||.||.|||:.|:|:.|||:|.:.:. .:.:.|..|..:|
  Rat    54 IFALALFGNALVVYVVTRSKAMRTVTNIFICSLALSDLLIVFFCIPVTMLQ-NVSDTWLGGAFIC 117

  Fly   180 HFVNYSQAVSVLVSAYTLVAISIDRYIAIMWP--LKPRITKRYATFIIAGVWFIALATALPIPIV 242
            ..|.:.|..:|:....|:..|:::|:..::.|  :|.:.|.:.|..::..||.:|:....|:..|
  Rat   118 KMVPFVQCTAVVTEILTMTCIAVERHQGLVHPFKMKQQYTNQRAFTMLGVVWLVAIIIGSPMWHV 182

  Fly   243 SGLDIPMSPWHTKCEKYICREMWPSRTQEYYYTLSLFALQFVVPLGVLIFTYARITIRVWAKRPP 307
            ..|:|.....:.| |...|.|.|.|...:..||..:....|::||.:|...|.:|...:|.|:..
  Rat   183 QRLEIKYDFLYEK-EHICCLEEWSSPVHQKIYTTFILVTLFLLPLLLLSVLYGKIGYELWIKKRV 246

  Fly   308 GEAETNRD------QRMARSKRKMVKMMLTVVIVFTCCWLPFNILQLLLNDEEF-AHWD--PLPY 363
            |:....|.      .::||.|::.|.||:|||::|..||.||:::.:::....| ..:|  .:..
  Rat   247 GDGSVLRTIHGKEMFKIARKKKRAVIMMVTVVVLFAVCWAPFHVVHMMIEYSNFEKEYDEVTIKM 311

  Fly   364 VWFAFHWLAMSHCCYNPIIYCYMNARFRSGFVQLMHRMPGLRRWCCLRSVGDRMNATSGEMTTKY 428
            ::.....:...:...|||:|..||..|:..||..:       .:|.::.................
  Rat   312 IFAIVQIIGFFNSICNPIVYALMNENFKKNFVSAV-------CYCVIKETPSPAQRHGSLGAIVM 369

  Fly   429 HRHVGDALFRKPKICIRNGSSTSSQSNEHIHHLHQRSSKATSDIFASEPI 478
            ||.|..|:...|   :.........||..|....|...|..|.: ||.|:
  Rat   370 HRRVKLAVGENP---VEIKGEAFGGSNMDIKWCEQPEKKKKSQM-ASCPL 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RYa-R	NP_001287552.1	7tm_4	113..>234	CDD:304433	42/120 (35%)
		7tm_1	122..383	CDD:278431	79/271 (29%)
RGD1560028	NP_001102709.1	7tm_4	60..>103	CDD:304433	22/42 (52%)
		7tm_1	61..331	CDD:278431	79/271 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166341013
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840