DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RYa-R and npy7r

DIOPT Version :9

Sequence 1:NP_001287552.1 Gene:RYa-R / 43253 FlyBaseID:FBgn0004842 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_001007219.1 Gene:npy7r / 449010 ZFINID:ZDB-GENE-040924-9 Length:372 Species:Danio rerio


Alignment Length:327 Identity:108/327 - (33%)
Similarity:177/327 - (54%) Gaps:28/327 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 TVMMNFSCDDY-DLLSEDMWSSAYFKIIVYMLYIPIFIFALIGNGTVCYIVYSTPRMRTVTNYFI 144
            |.:.|.|.:.| ....:|:......:|.:.:.|..|.:..|:||..|.|::.....|||||||||
Zfish    22 TSLGNDSVNTYKPAFVDDITKHLSVQISLILAYSLIILLGLVGNTLVIYMIILYRNMRTVTNYFI 86

  Fly   145 ASLAIGDILMSFFCVPSSFISLFILNYWPFGLALCHFVNYSQAVSVLVSAYTLVAISIDRYIAIM 209
            |:||:.|:::...|:|.:.: ..:|:.|.||..:||.|.||||:||.||..||..|:::||..|:
Zfish    87 ANLALADLMVDTVCLPFTLV-YTLLDEWKFGAVMCHMVPYSQALSVHVSILTLTIIALERYRCIV 150

  Fly   210 WPLKPRITKRYATFIIAGV-WFIALATALPIPI--------VSGLDIPMSPWHTKCEKYICREMW 265
            :.|..|: .|..:|||.|: |..|...|.|:.|        :..:|:.::         :|.|.|
Zfish   151 FHLGQRL-NRCTSFIIIGLTWAFAAILAGPLAIFREYRYEEIPYIDLRIA---------VCSEKW 205

  Fly   266 PSRTQE--YYYTLSLFALQFVVPLGVLIFTYARITIRVWAKRPPGEAETNRDQRMARSKRKMVKM 328
            |:.|..  ..|:||:..||:||||.::.:.|    :.:|.|.....:.:||:..:.| ::|..||
Zfish   206 PNGTNRDAVIYSLSMLLLQYVVPLAIISYAY----VCIWIKLKNHVSPSNRNDGIVR-RKKTTKM 265

  Fly   329 MLTVVIVFTCCWLPFNILQLLLNDEEFAHWDPLPYVWFAFHWLAMSHCCYNPIIYCYMNARFRSG 393
            :..||:||..|||||::.||..:.:....:.....::..||.:||.....||::|.:||..:|:|
Zfish   266 LALVVVVFAVCWLPFHMFQLASDLDLILKFKEYKLIYTLFHIVAMCSTFVNPLLYGWMNQNYRNG 330

  Fly   394 FV 395
            |:
Zfish   331 FL 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RYa-RNP_001287552.1 7tm_4 113..>234 CDD:304433 51/121 (42%)
7tm_1 122..383 CDD:278431 93/271 (34%)
npy7rNP_001007219.1 7tm_GPCRs 48..331 CDD:333717 101/298 (34%)
TM helix 1 50..74 CDD:320095 7/23 (30%)
TM helix 2 83..105 CDD:320095 10/21 (48%)
TM helix 3 121..143 CDD:320095 13/21 (62%)
TM helix 4 164..180 CDD:320095 6/15 (40%)
TM helix 5 214..237 CDD:320095 10/26 (38%)
TM helix 6 260..285 CDD:320095 12/24 (50%)
TM helix 7 299..324 CDD:320095 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3897
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.