DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RYa-R and Hcrtr2

DIOPT Version :9

Sequence 1:NP_001287552.1 Gene:RYa-R / 43253 FlyBaseID:FBgn0004842 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_945200.1 Gene:Hcrtr2 / 387285 MGIID:2680765 Length:460 Species:Mus musculus


Alignment Length:509 Identity:131/509 - (25%)
Similarity:214/509 - (42%) Gaps:107/509 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DDEGSNYGYGSTTTLSGLQFETYNITVMMNFSCDDYD-------LLSEDMWSSAYFKIIVYMLYI 113
            :|..|...:.|.:.|:..|....|.|        |||       |..|.:....|..::: ..||
Mouse     7 EDSLSRRNWSSASELNETQEPFLNPT--------DYDDEEFLRYLWREYLHPKEYEWVLI-AGYI 62

  Fly   114 PIFIFALIGNGTVCYIVYSTPRMRTVTNYFIASLAIGDILMSFFCVPSSFISLFILNYWPFGLAL 178
            .:|:.|||||..||..|:....|||||||||.:|::.|:|::..|:|::.: :.|...|.||.:|
Mouse    63 IVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLV-VDITETWFFGQSL 126

  Fly   179 CHFVNYSQAVSVLVSAYTLVAISIDRYIAIMWPLKPRITKRYATFIIAGVWFIALATALPIPIVS 243
            |..:.|.|.|||.||..||..|::||:.||..||..:.|.:.|...|..:|.::....:|..||.
Mouse   127 CKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVVIWIVSCIIMIPQAIVM 191

  Fly   244 GLDIPMSPWHTKCEKY-ICREMWPSRTQEYYYTLSLFALQFVVPLGVLIFTYARITIRVWAKRPP 307
            .....:.....|...: :|.|.|........|.:..|.:.::.||.::|..|.:|..::|.::.|
Mouse   192 ECSSMLPGLANKTTLFTVCDEHWGGEVYPKMYHICFFLVTYMAPLCLMILAYLQIFRKLWCRQIP 256

  Fly   308 GEAETNR----------------------------DQRMARSKRKMVKMMLTVVIVFTCCWLPFN 344
            |.:...:                            :.:..|::||..:|::.|::||..|:||.:
Mouse   257 GTSSVVQRKWKQQQPVSQPRGSGQQSKARISAVAAEIKQIRARRKTARMLMVVLLVFAICYLPIS 321

  Fly   345 ILQLL---------LNDEEFAHWDPLPYVWFAF-HWLAMSHCCYNPIIYCYMNARFRSGFVQLMH 399
            ||.:|         ..|.|..      |.||.| |||..::...|||||.:::.:||..|.....
Mouse   322 ILNVLKRVFGMFTHTEDRETV------YAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAFS 380

  Fly   400 RMPGLRRWCCLRSVGDRMNATSGEMTTKYHRHVGDALFRKPKICIRNGSSTSSQSNEHIHHLHQR 464
                    |||                ..|...||.|.|         ..||::|.:.:      
Mouse   381 --------CCL----------------GVHHRQGDRLAR---------GRTSTESRKSL------ 406

  Fly   465 SSKATSDI--FASEPIIVRRDVTTAVAVISKNKTDSPVRRSGSSGGTEANIRST 516
                |:.|  |.:...:....|.|:::.:.......|::......|..:::.||
Mouse   407 ----TTQISNFDNVSKLSEHVVLTSISTLPAANGAGPLQNWYLQQGVPSSLLST 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RYa-RNP_001287552.1 7tm_4 113..>234 CDD:304433 50/120 (42%)
7tm_1 122..383 CDD:278431 87/299 (29%)
Hcrtr2NP_945200.1 Required for response to orexin-A. /evidence=ECO:0000250|UniProtKB:O43614 33..49 5/15 (33%)
7tm_4 65..>194 CDD:304433 52/129 (40%)
7tm_1 71..364 CDD:278431 87/299 (29%)
Orexin_rec2 386..443 CDD:281778 14/75 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8802
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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