DRSC/TRiP Functional Genomics Resources

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Protein Alignment RYa-R and CG32547

DIOPT Version :9

Sequence 1:NP_001287552.1 Gene:RYa-R / 43253 FlyBaseID:FBgn0004842 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_001259682.1 Gene:CG32547 / 3346150 FlyBaseID:FBgn0052547 Length:1008 Species:Drosophila melanogaster


Alignment Length:460 Identity:111/460 - (24%)
Similarity:169/460 - (36%) Gaps:134/460 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 DYDLLSEDMWSSAYFKIIVYMLYIPIFIFALIGNG----TVCYIVYSTPRM-RTVTNYFIASLAI 149
            |.:.||..:..|: .|.:.::..|.....||:|..    .|.||:|.  |: :.||:.||.:||:
  Fly    84 DMERLSGPILKSS-IKSVYWLFLIQYAALALLGVVLNVIIVVYIMYH--RLYKDVTHAFIINLAL 145

  Fly   150 GDILMSFFCVPSSFISLFILNYWPFGLALCHFVNYSQAVSVLVSAYTLVAISIDRYIAIMWPLKP 214
            ...:.....:|.|.:.:.|.| |.||..||.|:...|.:.:.|:..:.:.|:.||...:..|||.
  Fly   146 CHFVQCALVLPVSLMVMLIQN-WIFGQFLCFFLPMLQDIPLHVAMISHILIAWDRMRWLNDPLKG 209

  Fly   215 RITKRYATFI-IAGVWFIALATALPIPI-------------VSGLDIPMSPWHTKCEKYICREMW 265
            |:    ..|: ....|...:..|||.||             :||:.:        |...:..:| 
  Fly   210 RL----PGFVCCCATWLTGMVIALPYPIYTIYVELGDYMPQLSGIGL--------CVVNLMDDM- 261

  Fly   266 PSRTQEYYYTLSLFALQFVVPLGVLIFTYARITIRVWAKRPP----------------------- 307
                ||  ||..||.|.:..|..:|.:.|.|.:..:   |||                       
  Fly   262 ----QE--YTRGLFLLMYCGPAILLSYLYIRTSQEL---RPPDGPFAVMMYEHRADLRMRQRNSS 317

  Fly   308 ---------------------GEAETNRD--------QRMARSKRKMVKMMLTVVIVFTCCWLPF 343
                                 |.:..:.|        .|..|.:|....|..|.|:    |..|.
  Fly   318 TSSVEPRHLSGGGVAGLSNGGGNSARSYDLYSAELDVHREKRKQRNFGSMAATQVV----CMCPL 378

  Fly   344 NIL---QLLLND--EEFAHWD--PLPYVWFAFHWLAMSHCCY-NPIIYCYMNARFRSGFVQLMHR 400
            .||   :|.|.:  |...|:|  .|.:||.||....:..|.| :.|:......|.|..|     |
  Fly   379 MILRFARLSLEETYENAKHFDFTYLMFVWVAFLPTVIFPCIYASQILPRDEQERLRGYF-----R 438

  Fly   401 MPGLRRWCCLRSVGDRMNATSGEMTTKYHRHVGDALFRKPKICIRNGSSTSSQSNEHIHHL---H 462
            :...|:....|    |.:|..|.       .||.: .|:..|.....|:|:|     :||.   |
  Fly   439 LSSKRKQKSQR----RSDAGGGS-------GVGGS-SREDSIEKDEASNTTS-----VHHAAEPH 486

  Fly   463 QRSSK 467
            :.|||
  Fly   487 KHSSK 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RYa-RNP_001287552.1 7tm_4 113..>234 CDD:304433 36/126 (29%)
7tm_1 122..383 CDD:278431 81/339 (24%)
CG32547NP_001259682.1 7TM_GPCR_Srd 104..>195 CDD:304638 27/93 (29%)
7tm_1 119..>292 CDD:278431 52/197 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24238
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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