Protein Alignment RYa-R and CG32547

DIOPT Version :10

• Sequence 1: NP_001287552.1
• Gene: RYa-R / 43253
• FlyBaseID: FBgn0004842
• Length: 518
• Species: Drosophila melanogaster
• Sequence 2: NP_728174.2
• Gene: CG32547 / 3346150
• FlyBaseID: FBgn0052547
• Length: 1008
• Species: Drosophila melanogaster
• Alignment Length: 460
• Identity: 111/460 - (24%)
• Similarity: 169/460 - (36%)
• Gaps: 134/460 - (29%)

  Fly    90 DYDLLSEDMWSSAYFKIIVYMLYIPIFIFALIGNG----TVCYIVYSTPRM-RTVTNYFIASLAI 149
            |.:.||..:..|: .|.:.::..|.....||:|..    .|.||:|.  |: :.||:.||.:||:
  Fly    84 DMERLSGPILKSS-IKSVYWLFLIQYAALALLGVVLNVIIVVYIMYH--RLYKDVTHAFIINLAL 145

  Fly   150 GDILMSFFCVPSSFISLFILNYWPFGLALCHFVNYSQAVSVLVSAYTLVAISIDRYIAIMWPLKP 214
            ...:.....:|.|.:.:.|.| |.||..||.|:...|.:.:.|:..:.:.|:.||...:..|||.
  Fly   146 CHFVQCALVLPVSLMVMLIQN-WIFGQFLCFFLPMLQDIPLHVAMISHILIAWDRMRWLNDPLKG 209

  Fly   215 RITKRYATFI-IAGVWFIALATALPIPI-------------VSGLDIPMSPWHTKCEKYICREMW 265
            |:    ..|: ....|...:..|||.||             :||:.:        |...:..:|
  Fly   210 RL----PGFVCCCATWLTGMVIALPYPIYTIYVELGDYMPQLSGIGL--------CVVNLMDDM- 261

  Fly   266 PSRTQEYYYTLSLFALQFVVPLGVLIFTYARITIRVWAKRPP----------------------- 307
                ||  ||..||.|.:..|..:|.:.|.|.:..:   |||
  Fly   262 ----QE--YTRGLFLLMYCGPAILLSYLYIRTSQEL---RPPDGPFAVMMYEHRADLRMRQRNSS 317

  Fly   308 ---------------------GEAETNRD--------QRMARSKRKMVKMMLTVVIVFTCCWLPF 343
                                 |.:..:.|        .|..|.:|....|..|.|:    |..|.
  Fly   318 TSSVEPRHLSGGGVAGLSNGGGNSARSYDLYSAELDVHREKRKQRNFGSMAATQVV----CMCPL 378

  Fly   344 NIL---QLLLND--EEFAHWD--PLPYVWFAFHWLAMSHCCY-NPIIYCYMNARFRSGFVQLMHR 400
            .||   :|.|.:  |...|:|  .|.:||.||....:..|.| :.|:......|.|..|     |
  Fly   379 MILRFARLSLEETYENAKHFDFTYLMFVWVAFLPTVIFPCIYASQILPRDEQERLRGYF-----R 438

  Fly   401 MPGLRRWCCLRSVGDRMNATSGEMTTKYHRHVGDALFRKPKICIRNGSSTSSQSNEHIHHL---H 462
            :...|:....|    |.:|..|.       .||.: .|:..|.....|:|:|     :||.   |
  Fly   439 LSSKRKQKSQR----RSDAGGGS-------GVGGS-SREDSIEKDEASNTTS-----VHHAAEPH 486

  Fly   463 QRSSK 467
            :.|||
  Fly   487 KHSSK 491

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RYa-R	NP_001287552.1	7tmA_PR4-like	106..394	CDD:320514	86/366 (23%)
		TM helix 1	107..133	CDD:320514	8/29 (28%)
		TM helix 2	140..165	CDD:320514	7/24 (29%)
		TM helix 3	179..209	CDD:320514	7/29 (24%)
		TM helix 4	220..241	CDD:320514	5/21 (24%)
		TM helix 5	271..300	CDD:320514	10/28 (36%)
		TM helix 6	320..350	CDD:320514	10/32 (31%)
		TM helix 7	362..387	CDD:320514	7/25 (28%)
CG32547	NP_728174.2	7tm_classA_rhodopsin-like	104..421	CDD:410626	82/345 (24%)
		TM helix 1	104..129	CDD:410626	7/24 (29%)
		TM helix 2	136..162	CDD:410626	7/25 (28%)
		TM helix 3	174..204	CDD:410626	7/29 (24%)
		TM helix 4	213..231	CDD:410626	4/17 (24%)
		TM helix 5	261..286	CDD:410626	11/31 (35%)
		TM helix 6	355..385	CDD:410626	10/33 (30%)
		TM helix 7	399..421	CDD:410626	7/21 (33%)