DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RYa-R and npy8br

DIOPT Version :9

Sequence 1:NP_001287552.1 Gene:RYa-R / 43253 FlyBaseID:FBgn0004842 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_571511.1 Gene:npy8br / 30713 ZFINID:ZDB-GENE-980526-208 Length:375 Species:Danio rerio


Alignment Length:383 Identity:105/383 - (27%)
Similarity:180/383 - (46%) Gaps:47/383 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SSAYFKIIVYMLYIPIFIFALIGNGTVCYIVYSTPRMRTVTNYFIASLAIGDILMSFFCVPSSFI 164
            ||..|.|:.|...:.:   .|:||..:..::.....||.|||.||.:|:..|||:...|:|.:.|
Zfish    23 SSTTFLIVAYSTMLAV---GLVGNTCLVVVITRQKEMRNVTNIFIVNLSCSDILVCLVCLPVTII 84

  Fly   165 SLFILNYWPFGLALCHFVNYSQAVSVLVSAYTLVAISIDRYIAIMWPLKPRITKRYATFIIAGVW 229
             ..:::.|..|.|||....:.|.:||.||.:::|.|:::|:..|:.|...:...|::...:|.:|
Zfish    85 -YTLMDRWILGEALCKVTPFVQCMSVTVSIFSMVLIALERHQLIIHPTGWKPVVRHSYLAVAVIW 148

  Fly   230 FIALATALPI---------PIVSGLDIPMSPWHTKCEKYICREMWPSRTQEYYYTLSLFALQFVV 285
            .||...:||.         |. ..|.:|.:|:   .:.:||.|.|||......||.:|...|:.:
Zfish   149 IIACFISLPFLSFNILTNSPF-HNLSLPFNPF---SDHFICIEQWPSEGNRLTYTTTLLLCQYCL 209

  Fly   286 PLGVLIFTYARITIRVWAKRPPGEAETNRDQRMARSKRKMVKMMLTVVIVFTCCWLPFNILQLLL 350
            ||.:::..|.||.:|:..::...|......|:.|:..:::..|:.::|..|..||||.|:...:.
Zfish   210 PLALILVCYFRIFLRLSRRKDMVERARGGRQKKAKGSKRVNAMLASIVAAFALCWLPLNVFNTIF 274

  Fly   351 NDEEFAHW--DPLPY-----VWFAFHWLAMSHCCYNPIIYCYMNARFRSGFVQLMHRMPGLRRWC 408
            :      |  :.:|.     ::.|.|..||:..|.||:||.::|..|:.....|:.|   .|.|.
Zfish   275 D------WNHEAIPVCQHDAIFSACHLTAMASTCVNPVIYGFLNNNFQKELKSLLSR---CRCWG 330

  Fly   409 CLRSVGDRMNATSGEMTTKYHRHVGDALFRKPKICIRNGSSTSSQSNEHIHHLHQRSS 466
            ...|......:|.....||     |..|        .|||:::.|.::. :.|.|:.|
Zfish   331 PAESYESFPLSTVSTGITK-----GSIL--------SNGSASTYQPHKK-NSLEQKES 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RYa-RNP_001287552.1 7tm_4 113..>234 CDD:304433 37/120 (31%)
7tm_1 122..383 CDD:278431 78/276 (28%)
npy8brNP_571511.1 7tm_4 38..>162 CDD:304433 39/127 (31%)
7tm_1 42..308 CDD:278431 78/276 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3897
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.