DRSC/TRiP Functional Genomics Resources

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Protein Alignment RYa-R and Tacr3

DIOPT Version :9

Sequence 1:NP_001287552.1 Gene:RYa-R / 43253 FlyBaseID:FBgn0004842 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_067357.1 Gene:Tacr3 / 21338 MGIID:892968 Length:452 Species:Mus musculus


Alignment Length:407 Identity:123/407 - (30%)
Similarity:193/407 - (47%) Gaps:63/407 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 MWSSAYFKIIVYMLYIPIFIFALIGNGTVCYIVYSTPRMRTVTNYFIASLAIGDILMSFFCVPSS 162
            :||.||..::.         .|:.||..|.:|:.:..|||||||||:.:||..|..::.|....:
Mouse    74 LWSLAYGLVVA---------VAVFGNLIVIWIILAHKRMRTVTNYFLVNLAFSDASVAAFNTLVN 129

  Fly   163 FISLFILNYWPFGLALCHFVNYSQAVSVLVSAYTLVAISIDRYIAIMWPLKPRITKRYATFIIAG 227
            || ..:.:.|.||...|.|.|:....:|..|.|::.||::|||:||:.|||||::......:|..
Mouse   130 FI-YGVHSEWYFGANYCRFQNFFPITAVFASIYSMTAIAVDRYMAIIDPLKPRLSATATKIVIGS 193

  Fly   228 VWFIALATALPIPIVSGLDIPMSPWHTKCEKYICREMWPSRTQEYY-YTLSLFALQFVVPLGVLI 291
            :|.:|...|.|..:.|  .|.:.|..|.|  |:   .||...:::: |.:.:..|.:..||.::.
Mouse   194 IWILAFLLAFPQCLYS--KIKVMPGRTLC--YV---QWPEGPKQHFTYHIIVIILVYCFPLLIMG 251

  Fly   292 FTYARITIRVWAKRPPGEAETNRDQRMARSKRKMVKMMLTVVIVFTCCWLPFNILQLLLN-DEEF 355
            .||..:.|.:|....||:. .::.....::|||:||||:.||:.|..||||:::..:|.. .::.
Mouse   252 VTYTIVGITLWGGEIPGDT-CDKYHEQLKAKRKVVKMMIIVVVTFAICWLPYHVYFILTAIYQQL 315

  Fly   356 AHWDPLPYVWFAFHWLAMSHCCYNPIIYCYMNARFRSGFVQLMHRMPGLRRWCCLRSVG--DRMN 418
            ..|..:..|:.|..|||||...|||||||.:|.|||:||.:..       |||....|.  |.:.
Mouse   316 NRWKYIQQVYLASFWLAMSSTMYNPIIYCCLNKRFRAGFKRAF-------RWCPFIQVSSYDELE 373

  Fly   419 ATSGEMTTKYHRHVGDALF-----------------------RKPKICIRNGSSTSSQSNEHIHH 460
            .    .||::|.....:|:                       ||.:...|:.|:......|.   
Mouse   374 L----KTTRFHPTRQSSLYTVSRMESVTVLYDPSEGDPAKSSRKKRAVPRDPSANGCSHREF--- 431

  Fly   461 LHQRSSKATSDIFASEP 477
                .|.:|:..|.|.|
Mouse   432 ----KSASTTSSFISSP 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RYa-RNP_001287552.1 7tm_4 113..>234 CDD:304433 44/120 (37%)
7tm_1 122..383 CDD:278431 90/262 (34%)
Tacr3NP_067357.1 7tm_4 81..>204 CDD:304433 45/132 (34%)
7tm_1 89..343 CDD:278431 90/262 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..452 10/51 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000620
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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