Protein Alignment RYa-R and LOC100333270

DIOPT Version :10

• Sequence 1: NP_001287552.1
• Gene: RYa-R / 43253
• FlyBaseID: FBgn0004842
• Length: 518
• Species: Drosophila melanogaster
• Sequence 2: XP_002666594.1
• Gene: LOC100333270 / 100333270
• -ID: -
• Length: 393
• Species: Danio rerio
• Alignment Length: 374
• Identity: 112/374 - (29%)
• Similarity: 192/374 - (51%)
• Gaps: 46/374 - (12%)

  Fly    98 MWSSAYFKIIVYMLYIPIFIFALIGNGTVCYIVYSTPRMRTVTNYFIASLAIGDILMSFFCVPS- 161
            :||.|:..::         :.|:.||..|.:|:.:..|||||||||:.:||:.|:     ||.:
Zfish    25 LWSVAFALVL---------LVAVTGNLIVIWIIVAHKRMRTVTNYFLLNLAVSDV-----CVAAL 75

  Fly   162 SFISLFIL---NYWPFGLALCHFVNYSQAVSVLVSAYTLVAISIDRYIAIMWPLKPRITKRYATF 223
            :.:..|:.   .:|.|..|.|.|.|:....:|..|.|::.||::|||:||:.|:|||::.:....
Zfish    76 NALVNFVYGAHGHWYFSSAYCRFQNFYPVAAVFASIYSMSAIALDRYMAIIHPMKPRLSAKVTKA 140

  Fly   224 IIAGVWFIALATALPIPIVSGLDIPMSPWHTKCEKYICREMWPSRTQE-YYYTLSLFALQFVVPL 287
            :|..||.:|...:.|:...|..::  .|..|.|  |:.   ||.:..: :.|.:.:..|.:::||
Zfish   141 VIVCVWILAAFLSFPLCFYSVTEV--LPHRTVC--YVA---WPRKDDDAFIYHVVVALLVYLLPL 198

  Fly   288 GVLIFTYARITIRVWAKRPPGEAETNRDQRMARSKRKMVKMMLTVVIVFTCCWLPFNILQLLLN- 351
            .::..||:|:.:.:|....||.:..|....: ::|||:||||:.||:.|..||||:::..::.:
Zfish   199 ALMAVTYSRVGLTLWGGDFPGHSSENLLDHL-QAKRKVVKMMVIVVVTFAICWLPYHVYFIVTSF 262

  Fly   352 DEEFAHWDPLPYVWFAFHWLAMSHCCYNPIIYCYMNARFRSGFVQLMHRMPGLRRWC-------C 409
            :.....:..:..|:.:..||:||...|||||||.:|:|||:||.::.       |||       |
Zfish   263 NRALRRFKWIQQVYLSVLWLSMSSSMYNPIIYCCLNSRFRAGFKRVF-------RWCPFIQMSNC 320

  Fly   410 ----LRSVGDRMNATSGEMTTKYHRHVGDALFRKPKICIRNGSSTSSQS 454
                |::...:....|...|.......|.|...:.|....:..|..|||
Zfish   321 DELELQTARFQQQRQSSVFTVTRMESDGSAAVSRRKSSSTSRCSVRSQS 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RYa-R	NP_001287552.1	7tmA_PR4-like	106..394	CDD:320514	93/293 (32%)
		TM helix 1	107..133	CDD:320514	5/25 (20%)
		TM helix 2	140..165	CDD:320514	9/25 (36%)
		TM helix 3	179..209	CDD:320514	12/29 (41%)
		TM helix 4	220..241	CDD:320514	5/20 (25%)
		TM helix 5	271..300	CDD:320514	7/29 (24%)
		TM helix 6	320..350	CDD:320514	14/29 (48%)
		TM helix 7	362..387	CDD:320514	12/24 (50%)
LOC100333270	XP_002666594.1	7tm_GPCRs	24..305	CDD:475119	96/301 (32%)
		TM helix 1	26..50	CDD:410628	8/32 (25%)
		TM helix 2	59..81	CDD:410628	8/26 (31%)
		TM helix 3	97..119	CDD:410628	7/21 (33%)
		TM helix 4	140..156	CDD:410628	4/15 (27%)
		TM helix 5	183..206	CDD:410628	5/22 (23%)
		TM helix 6	236..258	CDD:410628	11/21 (52%)
		TM helix 7	273..298	CDD:410628	12/24 (50%)