DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6271 and Pnlip

DIOPT Version :9

Sequence 1:NP_651526.1 Gene:CG6271 / 43252 FlyBaseID:FBgn0039476 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_037293.2 Gene:Pnlip / 25702 RGDID:3360 Length:465 Species:Rattus norvegicus


Alignment Length:320 Identity:99/320 - (30%)
Similarity:140/320 - (43%) Gaps:46/320 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 WMEAQEKLEGRGLTTVPVNFYLFTPKNPSSSKHIYATTKSISKSNFNPAHPTRFVIHGWTQSYLN 115
            |..||          :...|.|:|.:|..:.:.|.:...||..|||.....||.:|||:......
  Rat    46 WSPAQ----------INTRFLLYTNENQDNYQKITSDASSIRNSNFKTNRKTRIIIHGFIDKGEE 100

  Fly   116 SMNSDIRKAFLSKGDYNVIVVDWARARSVDYATSVMAVAATGKKVAKMINFLKDNHGLNLNDVYV 180
            :..||:.|........|.|.|||.......|..:...|...|.:||.::|.||.:.|.:.::|::
  Rat   101 NWLSDMCKNMFKVESVNCICVDWKGGSRATYTQATQNVRVVGAEVALLVNVLKSDLGYSPDNVHL 165

  Fly   181 IGHSLGAHVAGYAGKNTDGQVHTIIGLDPALPLFSYNKPNKRLNSDDAWYVESIQTNGGTL---- 241
            ||||||:||||.|||.|.|.:..|.|||.|.|.|.......||:..||.:|::|.|:...:    
  Rat   166 IGHSLGSHVAGEAGKRTFGAIGRITGLDAAEPYFQGTPEEVRLDPTDAQFVDAIHTDAAPIIPNL 230

  Fly   242 --GFLKPIGKGAFYPNGGKTQPGCP-------LDVTG---------ACSHGRSTTYYAEA-VSED 287
              |..:.:|...|:||||...|||.       :|:.|         ||:|.||..||.:: |:..
  Rat   231 GFGMSQTVGHLDFFPNGGMEMPGCQKNILSQIVDIDGIWEGTRDFAACNHLRSYKYYTDSIVNPT 295

  Fly   288 NFGTMKCGDYEEAVAKE---CGST-------YSSVRMGADTNAYMVEGDFYVPVNSKAPF 337
            .|....|..|....|.:   |||.       |:....|.....|.   .||:....|:.|
  Rat   296 GFSGFSCSSYNVFSANKCFPCGSEGCPQMGHYADKYPGKTKELYQ---KFYLNTGDKSNF 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6271NP_651526.1 Lipase 57..337 CDD:278576 95/312 (30%)
Pancreat_lipase_like 68..333 CDD:238363 94/297 (32%)
PnlipNP_037293.2 Lipase 17..352 CDD:395099 98/318 (31%)
PLAT_PL 355..465 CDD:238857
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338993
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28N19
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.