DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6271 and Lipc

DIOPT Version :9

Sequence 1:NP_651526.1 Gene:CG6271 / 43252 FlyBaseID:FBgn0039476 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_006243421.1 Gene:Lipc / 24538 RGDID:3009 Length:510 Species:Rattus norvegicus


Alignment Length:321 Identity:87/321 - (27%)
Similarity:140/321 - (43%) Gaps:85/321 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GRGLTTVP------------------VNFYLF-----------TPKNPSSSKHIYATTKSISKSN 95
            |:|:.|.|                  :.|.||           .|::|          :::.:..
  Rat    23 GQGVGTEPFGRNLGATEERKPLQKPEIRFLLFKDESDRLGCQLRPQHP----------ETLQECG 77

  Fly    96 FNPAHPTRFVIHGWTQSYLNSMNSD-----------------IRKAFLSKGD--YNVIVVDWARA 141
            ||.:||...:||||:.|...::..|                 |..|..|:..  .||.:|||...
  Rat    78 FNSSHPLVMIIHGWSGSESATVGKDSDNDSQVDGLLETWIWKIVGALKSRQSQPVNVGLVDWISL 142

  Fly   142 RSVDYATSVMAVAATGKKVAKMINFLKDNHGLNLNDVYVIGHSLGAHVAGYAGKNTDG--QVHTI 204
            ....||.:|......|::||.::.:|:::...:.:.|::||:||||||:|:||.:..|  ::..|
  Rat   143 AYQHYAIAVRNTRVVGQEVAALLLWLEESMKFSRSKVHLIGYSLGAHVSGFAGSSMGGKRKIGRI 207

  Fly   205 IGLDPALPLFSYNKPNKRLNSDDAWYVESIQT-----NGGTLGFLKPIGKGAFYPNGGKTQPGC- 263
            .|||||.|:|....||:||:.|||.:|::|.|     .|.::|..:||....||||||..|||| 
  Rat   208 TGLDPAGPMFEGTSPNERLSPDDANFVDAIHTFTREHMGLSVGIKQPIAHYDFYPNGGSFQPGCH 272

  Fly   264 --------------PLDVTGACSHGRSTTYYAEAVSEDN-----FGTMKCGDYEEAVAKEC 305
                          .:..|..|:|.||...:.:::...|     |.......:.:.:...|
  Rat   273 FLELYKHIAEHGLNAITQTIKCAHERSVHLFIDSLQHSNLQNTGFQCSNMDSFSQGLCLNC 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6271NP_651526.1 Lipase 57..337 CDD:278576 87/321 (27%)
Pancreat_lipase_like 68..333 CDD:238363 83/295 (28%)
LipcXP_006243421.1 Lipase 18..366 CDD:278576 87/321 (27%)
Pancreat_lipase_like 47..362 CDD:238363 83/297 (28%)
PLAT_LPL 369..504 CDD:238856
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338953
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

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