DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo1a and zip

DIOPT Version :9

Sequence 1:NP_001074688.1 Gene:Myo1a / 432516 MGIID:107732 Length:1043 Species:Mus musculus
Sequence 2:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster


Alignment Length:1100 Identity:322/1100 - (29%)
Similarity:519/1100 - (47%) Gaps:238/1100 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse    10 VEDLILLEPLDEESLIKNLQLRYENKEIYTYIGNVVISMNPYEQLPIYGPEFIAKYRDYTFYELK 74
            |||:..|..|:|.|::.|::.||.:..||||.|...:.:|||::||||..:.:.:|:....:|:.
  Fly   133 VEDMAELTCLNEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIKRHEVP 197

Mouse    75 PHIYALANVAYQSLKDRDRDQCILITGESGAGKTEASKLV---MSYVAAVCGKG----------- 125
            ||::|:.:.||:::.....||.||.||||||||||.:|.|   ::||||...||           
  Fly   198 PHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLI 262

Mouse   126 -----------------------EQVNSVK--------------EQLLQSNPVLEAFGNAKTIRN 153
                                   |.||.:|              :||||:||:|||||||||::|
  Fly   263 NFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKN 327

Mouse   154 NNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRVVKQLKGERNFHIFYQLLAGADAQLLKALKL 218
            :|||||||::.|.||..|...|..|..|||||||.::|.|.||.|||||||||||..:..:...|
  Fly   328 DNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFIL 392

Mouse   219 EEDTSVYGYLNGEVSKVNGMDDASNFRAVQHAMSVIGFSEEEIRQVLEVTALVLKLGNVKLTDEF 283
             :|...|.:|:.....|.|:||.:.|:|...:|:::|.:.|:...:..:.:.||..|::|...| 
  Fly   393 -DDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQE- 455

Mouse   284 QANGIPASGICDGKGIQEIGEMMGLNSTELERALCSRTMETGKEKVVTVLNVTQAQYARDALAKN 348
             .|...|: :.|....|:|..::||:.|::.||..:..::.|::.|.......|.::|.:|:||.
  Fly   456 -RNNDQAT-LPDNTVAQKIAHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIAKA 518

Mouse   349 IYSRLFDWIVKRINESIKVGTGEKKKVMGVLDIYGFEILEDNSFEQFVINYCNERLQQVFIELTL 413
            .|.|:|.|:|.|||.|:.....:....:|:||:.||||.|.|||||..|||.||:|||:|.....
  Fly   519 CYERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMF 583

Mouse   414 KEEQEEYKREGIPWTKVEYFDNGI----ICNLIEHSQRGILAMLDEECLRPGVVSDSTFLAKLNQ 474
            ..|||||:||||.|   ::.|.|:    ..:||: ...||:|:|||||..| ..:|.||:.||..
  Fly   584 ILEQEEYQREGIEW---KFIDFGLDLQPTIDLID-KPGGIMALLDEECWFP-KATDKTFVDKLVS 643

Mouse   475 LFSKHSHYESKVSQNAQRQYDRT--MGLSCFRISHYAGKVTYNVTGFIDKNNDLLFRDLSQTMWK 537
            ..|.|.            ::.:|  .|::.|.|.||||:|.|:...::.||.|.|..::...:..
  Fly   644 AHSMHP------------KFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQG 696

Mouse   538 AQHPLLKSLFPEGNPKEASLKRPPTAGTQF----------------KNSVAVLMKNLYSKNPNYI 586
            :|.|.:.:::.:.  :...:.:.....|||                |..:|.||..|.:.|||::
  Fly   697 SQDPFVVNIWKDA--EIVGMAQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFV 759

Mouse   587 RCIKPNDQQQKGRFTSEMVMVQARYLGLLENVRVRRAGYAFRQGYKPFLERYRLLSRSTWPRWNG 651
            |||.||.:::.|:..:.:|:.|.|..|:||.:|:.|.|:..|..::.|.:||.||:.:..|:...
  Fly   760 RCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELLTPNVIPKGFM 824

Mouse   652 DDREGVEKVLGSLTLSSEELAYGKTKIFIRSPKTLFYLEEQRRLRLQQLATLIQKVYRGWRCRTH 716
            |.::..||::.:|.|.|.....|::|||.|: ..|.:|||:|..::..|                
  Fly   825 DGKKACEKMIQALELDSNLYRVGQSKIFFRA-GVLAHLEEERDFKISDL---------------- 872

Mouse   717 YQQMRKSQILISAWFRGNKQKKHYGKIRSSVLLIQAFVRGWRARKNYRKYFRS-----------G 770
                                          ::..|||.||:.||:||:|..:.           .
  Fly   873 ------------------------------IVNFQAFCRGFLARRNYQKRLQQLNAIRIIQRNCA 907

Mouse   771 AALTLANFIYQSMAQKFLLNLKKNLPSTKVLDNTWPAAPYRCFNTANQELQRLFYQWKCKKFRDQ 835
            |.|.|.|:.:..:..|    :|..|..||                  ||.:.:..:.:.|:.|::
  Fly   908 AYLKLRNWQWWRLYTK----VKPLLEVTK------------------QEEKLVQKEDELKQVREK 950

Mouse   836 LSP----------KQVQTLREKLCASELFKGKKASYPQSVPIPFRGDYIGL--QGNPKLQRLKGR 888
            |..          |..|.|.||...:|..:.:                |.|  :......||..|
  Fly   951 LDTLAKNTQEYERKYQQALVEKTTLAEQLQAE----------------IELCAEAEESRSRLMAR 999

Mouse   889 EEGPVLVADTVKKVNRGNGKTSARILLLTKGHVILTDAKKSQAQIVIGLEDVAGVSVSSLQDGL- 952
            ::.   :.|.::::.....:...|:|.|        ..:|.:.::          ::..|::.| 
  Fly  1000 KQE---LEDMMQELETRIEEEEERVLAL--------GGEKKKLEL----------NIQDLEEQLE 1043

Mouse   953 --------FSLHLSEMSSAVSK--GDILLVSDHVVELLTKMYQAVLDATQRQLSVTVTEK 1002
                    ..|...::.:.:.|  .|:.|..|...:||.:  :.:|:.....||.|:.|:
  Fly  1044 EEEAARQKLQLEKVQLDAKIKKYEEDLALTDDQNQKLLKE--KKLLEERANDLSQTLAEE 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo1aNP_001074688.1 MYSc_Myo1 22..681 CDD:276829 255/731 (35%)
Actin-binding. /evidence=ECO:0000255 571..593 11/21 (52%)
IQ 742..764 CDD:197470 8/21 (38%)
Myosin_TH1 847..1042 CDD:368706 26/168 (15%)
zipNP_523860.2 Myosin_N 80..117 CDD:280832
Myosin_head 133..854 CDD:278492 261/743 (35%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 255/731 (35%)
Myosin_tail_1 931..2011 CDD:279860 37/227 (16%)
Prefoldin 1431..1515 CDD:298833
FAM76 <1847..1926 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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