DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlC and TwdlQ

DIOPT Version :10

Sequence 1:NP_651519.1 Gene:TwdlC / 43245 FlyBaseID:FBgn0039469 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_651496.1 Gene:TwdlQ / 43214 FlyBaseID:FBgn0039448 Length:245 Species:Drosophila melanogaster


Alignment Length:340 Identity:74/340 - (21%)
Similarity:113/340 - (33%) Gaps:137/340 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LFVVCVASLVATTLGRPEPPSPYSYH---------GL------------PQQQSQRALPLNAHPV 49
            |.::.:||:.|..||       |:|.         ||            .|||.|:         
  Fly     5 LLLLLIASVSAAKLG-------YNYQAAAGDRRFAGLIDAEATGFSSTSTQQQQQQ--------- 53

  Fly    50 PPQIYQPLPQEQSFANFAPPQQTYLPPQMHLDAIEQVAPTAAAAEPLNAYDDSYNMAHRLSGVQH 114
              |..|.|.|:.:                     :|..|.||         |.::          
  Fly    54 --QAQQELVQQNT---------------------QQQIPAAA---------DEFS---------- 76

  Fly   115 ASGYNNGPQETKVHKHIYVHVPPKDFEEEDAIQTRVHHQQGPKQKHYKIVFIKAPSAPAIRQPVV 179
                          |..|.:..|   |||.|.|....|.....:::.:::|||:|....:....:
  Fly    77 --------------KEFYTYAAP---EEEFADQEATEHIASMLKRNLRVLFIKSPEHQGLTNAAL 124

  Fly   180 PPPPQ-NEEKTLIYVLHKKPEQEQDIV-IPTPPPTKPSKPEVYFIKYKTKKDEAPVYGPPPAEME 242
            ....| :|::|.||||.|:.:..|... :......:..||||:|:||:|.:|          .:.
  Fly   125 QLAKQASEQRTAIYVLSKQADVSQLAQRLANENQAQSPKPEVHFVKYRTPED----------AVR 179

  Fly   243 PRQATAEDFAPLA--------EVADVLPPTTLAPAPEPEVEQPAIPSAVYGPPTAAAYTGEEVQT 299
            .:|...:.|..|.        .||.||..:: |||.....||                  .|.|.
  Fly   180 AQQLIQQQFDSLGGSSRSSDEGVAPVLDFSS-APAAISVQEQ------------------NEAQN 225

  Fly   300 TLSA--PANQYLPPA 312
            .:.|  |..:|||.|
  Fly   226 QVQAVTPLTKYLPAA 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlCNP_651519.1 DUF243 125..227 CDD:472232 29/103 (28%)
TwdlQNP_651496.1 DM5 73..174 CDD:214776 30/127 (24%)

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