DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlC and TwdlR

DIOPT Version :10

Sequence 1:NP_651519.1 Gene:TwdlC / 43245 FlyBaseID:FBgn0039469 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_733161.2 Gene:TwdlR / 318586 FlyBaseID:FBgn0051081 Length:325 Species:Drosophila melanogaster


Alignment Length:242 Identity:65/242 - (26%)
Similarity:106/242 - (43%) Gaps:48/242 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PLNAY-------DDSYNMAHRLSGVQHASGYNNGPQETKVHKHIYVHVPPKD-FEEEDAIQTRVH 151
            |:|:|       |:.|          |:...|:..:....|||.|....|.| .||.|..:|:: 
  Fly    39 PVNSYGNEAVLGDERY----------HSQPGNHYQENADFHKHFYAFEAPYDSVEEVDLAETKL- 92

  Fly   152 HQQGPKQKHYKIVFIKAPSAPAIRQPVVPPPPQ-NEEKTLIYVLHKKPE-QEQDIVIPTPPPTKP 214
              ....||:.::||||||...|:...:.....| :|:||.||||:|:.: .|....:........
  Fly    93 --SSLAQKNLQVVFIKAPENKAVVGALNALAKQTSEDKTAIYVLNKQTDVNELASQLSALKAHHK 155

  Fly   215 SKPEVYFIKYKTKKDEAPV-------YGPPPAEMEPRQATAEDFAPLAEVADVLPPTTLAPAPEP 272
            .||:|:|:||||:::.|..       ||...:..:|.:|::..:               .|..:|
  Fly   156 HKPQVHFVKYKTEEEAAQAQQYIQAQYGGGSSIPQPGKASSLGY---------------YPEQQP 205

  Fly   273 EVEQPAIPSAVYGPPTAAAYTGEEVQTTLSAPANQYLPPATAPAALA 319
            :.||.| ||..| |.....|.....|:... |.:.||||..:.::::
  Fly   206 QYEQDA-PSEEY-PAGQVGYLPSPQQSAYQ-PQSGYLPPLPSYSSIS 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlCNP_651519.1 DUF243 125..227 CDD:472232 36/104 (35%)
TwdlRNP_733161.2 DUF243 68..165 CDD:460806 33/99 (33%)
PRK10263 <156..>252 CDD:236669 29/112 (26%)

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