DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31075 and Ssadh

DIOPT Version :9

Sequence 1:NP_001247324.1 Gene:CG31075 / 43244 FlyBaseID:FBgn0051075 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster


Alignment Length:479 Identity:176/479 - (36%)
Similarity:282/479 - (58%) Gaps:19/479 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 INNEFVDSVSGK-TFATFNPATSKEIVQVSEGDKADIDLAVKAAKKAFHRDSEWRKLSPLQRTNL 101
            ::..:|||.:.| ||...|||....|.:|.....||...|:.|||:|: ...|||.|:...|:||
  Fly    33 VDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAY-ESKEWRSLTAKDRSNL 96

  Fly   102 MNKLCALMDRDKAFLASLETQDNGKPYAEALFDVTYSILTLQYYAGWTDKFFGDTIPAGGFVSMT 166
            :.|...|:::....:|.:.|.::|||..|:..:|.|....::::|....:.:|:.:|:   .|..
  Fly    97 LKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAFVEWFAEEARRIYGEIVPS---ASPN 158

  Fly   167 R-----KEPVGVVGQIIPWNYPLLMLAWKWGPALAVGCTIIMKPAEQTPLTALHMAALAKEAGFP 226
            |     |:|:||...|.|||:|:.|:..|.|.|||.|||:::||:|.||||||.:|.||.:||.|
  Fly   159 REIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIP 223

  Fly   227 AGVINVV--NGFGPTAGAAISAHPDIAKVAFTGSVEIGRIVMQAAATSNLKRVSLELGGKSPVVV 289
            .||||||  |...| .|......||:..::||||.|:|:::.:.:| ..:||:.|||||.:|.:|
  Fly   224 KGVINVVTTNKAAP-IGDLFCKSPDVRGISFTGSTEVGKLLFRNSA-DGIKRICLELGGNAPFIV 286

  Fly   290 FDDADIDFAVETTHEALFSNHGQSCCAGSRTYVHEKIYDEFVAKAAAKAKARKVGNPFEQNVQQG 354
            ||.|||:.||:....:.|.|.||:|.:.:|.:|.:.:||:||.:...:.:|.|:|:....:||.|
  Fly   287 FDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQIG 351

  Fly   355 PQIDDDMLTKVLGYIESGKKEGAKLQAGGKRIGNVG-FFVEPTVFSDVKDDMRIAQEEIFGPVQS 418
            |.|::....||.|::|..:.:.|.:..||:.:.:.| .|..||:.:||....::..||:||||.|
  Fly   352 PLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGPVVS 416

  Fly   419 IFKFSSLEEMIDRANNVQYGLAAGVITNDINKALKFANNVDAGSVWINCYDAVLPS--TPFGGYK 481
            |.:|...||.:.:||:.:.|||....:.::.:..:.|..::.|.|.:|  :.::.:  .||||.|
  Fly   417 IIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVN--EGIISAAEAPFGGVK 479

  Fly   482 HSGIGRELGKDGLDNYLETKTITM 505
            .||:|||..|.|:|:|::.|.|.|
  Fly   480 ESGVGREGSKHGIDDYVDIKYICM 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31075NP_001247324.1 ALDH-SF 33..506 CDD:299846 176/479 (37%)
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 169/461 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454130
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.