DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31075 and alh-1

DIOPT Version :9

Sequence 1:NP_001247324.1 Gene:CG31075 / 43244 FlyBaseID:FBgn0051075 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_498081.2 Gene:alh-1 / 175691 WormBaseID:WBGene00000107 Length:510 Species:Caenorhabditis elegans


Alignment Length:480 Identity:282/480 - (58%)
Similarity:364/480 - (75%) Gaps:2/480 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EPNYCQLFINNEFVDSVSGKTFATFNPATSKEIVQVSEGDKADIDLAVKAAKKAFHRDSEWRKLS 94
            :|.|..:|||||||.:.|||||.|.|||..|.:.||:||||.|:::|||||:.||...||||::.
 Worm    26 KPQYTGIFINNEFVPAKSGKTFETINPANGKVLAQVAEGDKTDVNIAVKAAQNAFRIGSEWRRMD 90

  Fly    95 PLQRTNLMNKLCALMDRDKAFLASLETQDNGKPYAEAL-FDVTYSILTLQYYAGWTDKFFGDTIP 158
            ..||..|:|:|..||:||:..|||||:.|||||||.|. .|:..||.||:|||||.||..|.|||
 Worm    91 ASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWADKNHGKTIP 155

  Fly   159 -AGGFVSMTRKEPVGVVGQIIPWNYPLLMLAWKWGPALAVGCTIIMKPAEQTPLTALHMAALAKE 222
             .|.:.:.||.|||||.|||||||:||||.|||.|||||:|.|::||.||||||:|||:|||.||
 Worm   156 IEGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAMGNTVVMKVAEQTPLSALHVAALTKE 220

  Fly   223 AGFPAGVINVVNGFGPTAGAAISAHPDIAKVAFTGSVEIGRIVMQAAATSNLKRVSLELGGKSPV 287
            ||||.||:|::.|:|.|||.|||:|.|:.|||||||.|:||:||:|||.||:|:|:||||||||.
 Worm   221 AGFPDGVVNIIPGYGHTAGQAISSHMDVDKVAFTGSTEVGRLVMKAAAESNVKKVTLELGGKSPN 285

  Fly   288 VVFDDADIDFAVETTHEALFSNHGQSCCAGSRTYVHEKIYDEFVAKAAAKAKARKVGNPFEQNVQ 352
            ::|.|||::.:|...:..||.|.||.|||||||:|..||||:|||::...|:...:|:||:....
 Worm   286 IIFADADLNDSVHQANHGLFFNQGQCCCAGSRTFVEGKIYDDFVARSKELAEKAVIGDPFDLKTT 350

  Fly   353 QGPQIDDDMLTKVLGYIESGKKEGAKLQAGGKRIGNVGFFVEPTVFSDVKDDMRIAQEEIFGPVQ 417
            ||||:|...:..:|.||.:|||:||:|..||.:.|:.|.||:||:|::|||.|.||||||||||.
 Worm   351 QGPQVDGKQVETILKYIAAGKKDGAQLVTGGAKHGDQGHFVKPTIFANVKDQMTIAQEEIFGPVM 415

  Fly   418 SIFKFSSLEEMIDRANNVQYGLAAGVITNDINKALKFANNVDAGSVWINCYDAVLPSTPFGGYKH 482
            :|.:|.::||::::|||..|||||||:|.||:|||..||...|||||:||||....:.||||:|.
 Worm   416 TIIRFDTMEELVEKANNTIYGLAAGVMTKDIDKALHIANATRAGSVWVNCYDVFDAAAPFGGFKQ 480

  Fly   483 SGIGRELGKDGLDNYLETKTITMKL 507
            ||||||||:.||:.|.|.||:|:|:
 Worm   481 SGIGRELGEYGLEAYTEVKTVTIKV 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31075NP_001247324.1 ALDH-SF 33..506 CDD:299846 280/474 (59%)
alh-1NP_498081.2 ALDH_F1AB_F2_RALDH1 24..504 CDD:143459 281/477 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S334
OMA 1 1.010 - - QHG53964
OrthoDB 1 1.010 - - D153834at2759
OrthoFinder 1 1.000 - - FOG0000158
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100163
Panther 1 1.100 - - O PTHR11699
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X158
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.880

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