DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5521 and GARNL3

DIOPT Version :10

Sequence 1:NP_001163748.1 Gene:CG5521 / 43242 FlyBaseID:FBgn0039466 Length:1964 Species:Drosophila melanogaster
Sequence 2:XP_005252324.1 Gene:GARNL3 / 84253 HGNCID:25425 Length:1076 Species:Homo sapiens


Alignment Length:638 Identity:125/638 - (19%)
Similarity:218/638 - (34%) Gaps:205/638 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1392 GGITAGLVTADKQVRVLMRDLNGKACWDASILYSEPRNAEEPP--------KTTPKIQHSQPLDS 1448
            ||:.|.|:   :|.|..:|   .:.|     .:..||.|.:||        |.....|.:|.:..
Human     6 GGVAAALL---RQKRAALR---RRGC-----SFESPRTAAQPPGPLMDPLTKVPCGSQIAQTILW 59

  Fly  1449 MATSMVTHTPSPRHTLRHRPAGVLPL----AKDMAPDLDQLDDMLAYIGHTSPECVAPTVSQLNA 1509
            .|.|.::.             |:.||    .||  |:|:                     ||:|.
Human    60 KAKSSLSF-------------GIQPLQTWPTKD--PELE---------------------SQVNL 88

  Fly  1510 PTASPLS------GNQEAQAISVILNQ------------RLLEQEFVTHSTQAPSPALRHASSNS 1556
            ..:..|.      ..:...::.::::.            |:.......::|..|....|   ::.
Human    89 SVSEDLGCRRGDFSRKHYGSVELLISSDADGAIQRAGRFRVENGSSDENATALPGTWRR---TDV 150

  Fly  1557 SLQQPDQRS----------LHSTTASFDSLPTRTEMPF---------------QYCRLLFSHLGL 1596
            .|:.|:..:          :|......|:    .:.||               ||..:|      
Human   151 HLENPEYHTRWYFKYFLGQVHQNYIGNDA----EKSPFFLSVTLSDQNNQRVPQYRAIL------ 205

  Fly  1597 AGWERRSRTHL--------------------LQRSEKLMRELRNVDLQK----CRE-----THKM 1632
              |.:.....:                    |.:.||..||:.:.::||    ..|     ..|.
Human   206 --WRKTGTQKICLPYSPTKTLSVKSILSAMNLDKFEKGPREIFHPEIQKDLLVLEEQEGSVNFKF 268

  Fly  1633 AVIYVAAGQEDKGSILRNTSGSSTYEMFVSALGWEIDLETHNGFLGGLPRQG--CGATAPYYATP 1695
            .|::...||.....:..|..||..::.|::.||..|.|:...|:.|||..:.  .|..:.|....
Human   269 GVLFAKDGQLTDDEMFSNEIGSEPFQKFLNLLGDTITLKGWTGYRGGLDTKNDTTGIHSVYTVYQ 333

  Fly  1696 FLEVVYHVATRMP-SDSSEAMLLKTRHLGNDEVHIVWSEHNRD---YRRDILPTEFCDVLIVV-Y 1755
            ..|:::||:|.:| |..::..:.:.||:|||.|.||:.|....   ::..::.:.|..:..:| |
Human   334 GHEIMFHVSTMLPYSKENKQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHIFALVRY 398

  Fly  1756 PLRNGLFRVTVNRKPEVPWFGP-------LANESVVSGACLATLIRA------TAINASRTKRAA 1807
            ..:|..:|:.:..:..||.|||       ..:........|..||..      |...|.:.:|..
Human   399 NQQNDNYRLKIFSEESVPLFGPPLPTPPVFTDHQEFRDFLLVKLINGEKATLETPTFAQKRRRTL 463

  Fly  1808 LPLYQQFYEE----------RNRSLDSV------SSRYKESTTFEDFASRIYNPMPLSTLGTLRE 1856
            ..|.:..:::          ..||...|      |:|.||.....:|. ||...:.|.   ::..
Human   464 DMLIRSLHQDLMPDLHKNMLNRRSFSDVLPESPKSARKKEEARQAEFV-RIGQALKLK---SIVR 524

  Fly  1857 SNASSSAAPLASAL--------------LDHNRASVKGWVQA---SIDSGPIM 1892
            .:|.||.|  ||.:              ..|.......|.||   |.|:|.::
Human   525 GDAPSSLA--ASGICKKEPWEPQCFCSNFPHEAVCADPWGQALLVSTDAGVLL 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5521NP_001163748.1 RALGAPB_N 491..619 CDD:466561
Rap_GAP 1648..1820 CDD:460463 46/201 (23%)
GARNL3XP_005252324.1 Rap_GAP 284..462 CDD:460463 44/177 (25%)
CNH 561..859 CDD:459938 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.

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