DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5521 and RapGAP1

DIOPT Version :9

Sequence 1:NP_001163748.1 Gene:CG5521 / 43242 FlyBaseID:FBgn0039466 Length:1964 Species:Drosophila melanogaster
Sequence 2:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster


Alignment Length:909 Identity:191/909 - (21%)
Similarity:296/909 - (32%) Gaps:332/909 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1315 LVTHIGHFPMGIGASRLS----------------------------------SMVEEQDDIGNAA 1345
            ||.| || |:.:|:|.:|                                  |..|.:....|:|
  Fly     7 LVDH-GH-PIIVGSSEISLAPSSAASSPKPLHRMIKYWRNSSGKIPGLRKSESFAEYRRHSSNSA 69

  Fly  1346 -----YGGQVET---RRDSVELPSVVSAQNMQL----------FMLNSGLVASFIELPTLKLPGG 1392
                 .||:..|   |:...:...:.|.:|:.:          ||.|:..     :.|.    ||
  Fly    70 TISGGSGGRSSTSSARQLQYQRLEMESCENIDMLTEPLRRQHAFMANTQK-----QQPA----GG 125

  Fly  1393 GITAGLVTADKQ----------------VRVLMRDLNGKACWDASIL-------YSEPRNAEE-- 1432
            |..:|.||...:                .||....|:.:.|    :|       :....||.|  
  Fly   126 GSGSGSVTHSPERLRGATTATQDLFELLERVQCSRLDDQRC----VLPAYFSQNHHRGSNASEER 186

  Fly  1433 -PPKTTPKIQHSQPLDSMATSMVTHTPSPRHTLRHRPAGVLPLAKDMAPDLDQLDDMLAYIGHTS 1496
             |...:|...|:.|    ....:.|:.| |.||||.                        :.|:|
  Fly   187 VPQPHSPHDSHAHP----HNGGLQHSGS-RATLRHS------------------------MNHSS 222

  Fly  1497 PECVAPTVSQLNAPTASPLSGNQEAQAISVILN-----------------------QRLLEQEFV 1538
            ...|:.:... :.|.:..|||...|....::.|                       |||||:.. 
  Fly   223 SSTVSGSACS-STPASPQLSGVVSASGCQLLSNGHHYQSQSSVSSNSSIVSAIPASQRLLEEAL- 285

  Fly  1539 THSTQAPSPAL-------------RHASSNSSLQQPDQRSLHSTT--ASFDSLPT-RTEMPFQYC 1587
              :..||.|.:             .|.....:...|   .|..||  |.|::..| :....|...
  Fly   286 --AKPAPYPMILLPLHGGYWMDGTEHECGYDARGNP---LLPQTTWMAKFETDDTAKCYRRFYAA 345

  Fly  1588 RLLFSHLGLAGWERRSRTHLL---------QRSEKLMRELR------------------------ 1619
            |   .|..|.|.:.:....||         |...:::..||                        
  Fly   346 R---EHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCLLPQPSPAKMAH 407

  Fly  1620 ----NVDLQK-----CRE--------------TH-KMAVIYVAAGQEDKGSILRNTSGSSTYEMF 1660
                |:.::.     |.:              :| |..|:|...||..:..:..|...|..::.|
  Fly   408 TLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTEEELFGNQQTSPAFDEF 472

  Fly  1661 VSALGWEIDLETHNGFLGGLPRQG--CGATAPYYATPFLEVVYHVATRMP-SDSSEAMLLKTRHL 1722
            :..||..|.|:.|.|:.|||..|.  .|.||.|......|:::||:|.:| ::.....|.:.||:
  Fly   473 LDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFHVSTLLPHTEGDPQQLQRKRHI 537

  Fly  1723 GNDEVHIVWSEHNRDYRRDILPTEFCDVLIVVYPLR----NGLFRVTVNRKPEVPWFGP-LANES 1782
            |||.|.||:.|.|..:..|::.:.|....|||.|:.    :..::|:|..:.:||:||| |.|.:
  Fly   538 GNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNTPHTRYKVSVTARDDVPFFGPTLPNPA 602

  Fly  1783 VV-SGACLATLIRATAINASRT-----------KRAALPLYQQFYEE-RNRSLD---------SV 1825
            |. .|......|....|||...           :|....|.|...|| |.::.|         |.
  Fly   603 VFRKGQEFKEFILTKLINAENACYKAEKFAKLEQRTRTSLLQNLCEELREKTRDFLGTDLSQTSA 667

  Fly  1826 SSRYKESTTFE-----DFASRIYNPM--------------------PLST--------LGTL--- 1854
            .|...|:...|     :..||..:.:                    |..|        ||||   
  Fly   668 GSPTPETPKAESGSGGNAGSRFIDTVKKALIMRVRSQSVDTGNGHGPGQTDKFSVNTKLGTLNSK 732

  Fly  1855 --------------------------RESNASSSAAP-LASALLDHNRA-SVKGWVQASIDSGPI 1891
                                      :.||.|:|::| :.|...::|.. |:.|.:..:...|.:
  Fly   733 KETHPEMQTPNLNTCSRTASKSSSKSKSSNESTSSSPDITSRQANNNNTNSIGGHLPQNGTGGGV 797

  Fly  1892 MGIAPSASAGSTAAMEAATGMSSASPRGPRKLGAPFKSVTKKHSLQHIAVGGGAGAGGDTPPES 1955
              :|.:.||.....:..|| ||..|.      .:...||.....:.|:. ||......||..||
  Fly   798 --VAAAVSAAQNGVVAVAT-MSETSD------DSSLNSVDLDPMMAHLD-GGATYIDSDTGLES 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5521NP_001163748.1 Rap_GAP 1648..1820 CDD:280332 60/192 (31%)
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:280368 4/24 (17%)
Rap_GAP 460..639 CDD:280332 55/178 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3686
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.